Agarivorans sp. OAG1: OAG1_01400
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Entry
OAG1_01400 CDS
T09980
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
agar
Agarivorans sp. OAG1
Brite
KEGG Orthology (KO) [BR:
agar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
agar03009
]
OAG1_01400 (dbpA)
Enzymes [BR:
agar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
OAG1_01400 (dbpA)
Ribosome biogenesis [BR:
agar03009
]
Prokaryotic type
rRNA helicases
OAG1_01400 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_19
AAA_30
CMS1
PG_0320-like_C
P-loop_SecA
PG_binding_2
Motif
Other DBs
NCBI-ProteinID:
BEU01340
LinkDB
All DBs
Position
complement(143076..144464)
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AA seq
462 aa
AA seq
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MSQTDFSTLALHPDLLKNLETLGYSSMTPIQAQSLPLILDGKDVIAQGKTGSGKTAAFGL
GLLNALEVKRFRIQTLVLCPTRELADQVAKEIRKLARSIHNIKVLTLCGGMPFGPQIGSL
EHGAHIVVGTPGRIEEHLRKGTLRLDNVKNLILDEADRMLEMGFQSAIDAIIELAPKQRQ
TLLFSATFPEQIESIANNIMHQPVRVEVASTHDNSSISQHFFKVDDNEQRMLALRLLLLQ
HRPKSSVVFCNTKREAQEVADELSLLGFSALALHGDLEQRERDQTLVQFANNSAAILVAT
DVAARGLDIDSLDAVFNYHLARDTEVHVHRIGRTGRAGSKGIACSFFSDKEHYKVALLED
YLGRSINDEELPSMALLNKKPAAPLMATLQIDGGKKQKVRAGDILGALTGENGIAGAQVG
KINLFDNRAYVAVEREALKRARKKLEDGKMKGRSFRVRHLPC
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
gtgagccaaacagatttttccactcttgccctacaccccgatctacttaaaaacttagag
actctgggttatagctcaatgacgccgattcaagcgcaaagcctaccgctgattttggac
ggtaaagatgtgattgcccaaggtaaaaccggctcgggcaaaaccgctgcctttggccta
ggcctgctaaatgccttagaggtaaaacgctttcgcattcaaaccctagtattgtgccca
actcgcgaactggctgaccaagtggccaaagaaattcgcaaactggcgcgcagcattcac
aacattaaagtgcttaccttatgtggcggcatgccttttggcccgcaaatcggttcttta
gagcacggcgcgcacattgtagtgggcacgccagggcgcattgaagagcatttacgcaaa
ggcacattacgtttagataacgtgaaaaatttaatcttagatgaagccgatagaatgctg
gaaatgggctttcaatcggccattgatgcgattattgagctggctcccaaacagcgccaa
accttgttatttagtgccaccttccccgagcaaatcgaaagtatcgccaacaatattatg
caccagccagtgcgagtagaagtggccagcacccacgacaatagctctattagccaacac
ttttttaaagtagatgataatgaacagcgcatgctagctttgcgtttattgctattacaa
catcgccctaaatccagcgttgtgttttgcaataccaagcgcgaagctcaagaagtggcc
gatgaacttagcttactcggttttagcgctttagccctgcatggcgatttagagcagcgc
gaacgagaccaaaccttagtgcaatttgccaataacagtgcggcaattttagtggctacc
gacgtagcagctcgtggcttagatattgactctttagatgcagtattcaactaccactta
gcgcgcgataccgaagtgcatgtgcaccgcattggccgaaccggacgtgccggcagcaaa
ggtattgcctgttctttctttagcgataaagagcactataaagtggccttactagaagac
taccttggccgcagcattaacgatgaagagcttccatcaatggctttgcttaacaaaaag
ccagccgctccgcttatggctaccttgcaaattgatggcggtaaaaagcaaaaagtacgc
gccggagatattcttggcgcactcaccggtgaaaatggcattgcaggcgcacaagtaggc
aaaattaacttgtttgataaccgcgcctatgtggctgtagagcgagaggcactgaaacgt
gcacgcaaaaaactggaagacggtaaaatgaaaggacgctcttttagagttcgtcacctg
ccttgctaa
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