Agarivorans sp. OAG1: OAG1_03850
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Entry
OAG1_03850 CDS
T09980
Symbol
trmA
Name
(GenBank) tRNA/tmRNA (uracil-C(5))-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
agar
Agarivorans sp. OAG1
Brite
KEGG Orthology (KO) [BR:
agar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
agar03016
]
OAG1_03850 (trmA)
Enzymes [BR:
agar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
OAG1_03850 (trmA)
Transfer RNA biogenesis [BR:
agar03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
OAG1_03850 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_4
Methyltransf_31
Methyltransf_25
MTS
TRM5-TYW2_MTfase
Methyltransf_15
Methyltransf_11
Methyltransf_12
Cons_hypoth95
PrmA
DREV
TehB
MethyltransfD12
Methyltransf_17
Motif
Other DBs
NCBI-ProteinID:
BEU01585
LinkDB
All DBs
Position
complement(416519..417622)
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AA seq
367 aa
AA seq
DB search
MSAIAYYPEQYQQLLADKVAKRLEQFAEFSPAQPSVFASPTNHYRMRAEFRVWHEGDDLF
YIMFDQQTKQKFRVDSFPPASEIINQLMPILVEQLKPNPLLRHKLFQVDFLSTLSGEVIV
SMLYHKPIDEAWRVEAEKLKAELSKQFSIQLIGRSRKQKMCLDQDRVDEVLTVNGEKLIY
QQIENSFTQPNAIVNQHMLEWAQSATSDSQGDLLELYCGNGNFSLALAKNFNRVLATEIA
KPSVEAAQYNIKHNNIDNVKIIRLSAEEFTQAMLGEREFRRLKEADVDLSTYQCDTILVD
PPRAGLDDATLGMVQGYDNIVYISCNPNTLYDNLSELSRTHKISHWALFDQFPYTDHIEV
GMYLQRR
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctattgcatactacccagaacagtaccaacaactattggccgacaaagtggca
aaacgcttagagcagtttgccgaattttcgcctgctcaaccgagtgtatttgcatcaccg
acgaatcattaccgaatgcgcgctgagtttagggtgtggcacgaaggtgacgatctcttc
tacatcatgtttgatcagcaaaccaaacaaaaatttagagtagacagctttcctccggct
agcgaaatcattaaccagcttatgccaattttagttgagcagctaaaaccaaacccgctg
ctacgccacaaactgtttcaagtggattttttatctactttaagtggcgaagtgatagta
agcatgctctaccacaagcctatcgacgaggcatggcgtgtagaagccgaaaaactaaaa
gctgagctaagcaagcaattttccattcagctaattggtcgctcacgtaaacaaaaaatg
tgtttagaccaagatagagtagacgaagtacttactgttaatggtgaaaaacttatttac
cagcaaatagaaaacagcttcactcaacctaacgcaatagtaaatcaacacatgttggaa
tgggcgcaaagcgccaccagcgatagccaaggtgatttgctagaactatattgtggcaat
ggtaacttctcattagccttagccaaaaacttcaatcgcgtgttagccaccgaaatcgcc
aaaccctcggttgaagcagcgcaatacaacattaaacataacaacatcgacaacgtaaaa
atcattcgtttgtcggcagaagaatttactcaagcgatgttaggtgagcgcgagttccgc
cgcctaaaagaagccgatgttgatttaagcacttatcaatgcgataccattttggttgac
ccaccacgagcgggtttagatgatgcaaccttaggcatggtgcaaggctacgacaacatt
gtttatatctcgtgtaaccctaatacactttacgacaatctaagtgagttaagccgtacc
cacaaaattagccattgggcgctgtttgaccagtttccctataccgaccacatcgaagta
ggcatgtacctgcagcgtcgctag
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