Agarivorans sp. OAG1: OAG1_05490
Help
Entry
OAG1_05490 CDS
T09980
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
agar
Agarivorans sp. OAG1
Brite
KEGG Orthology (KO) [BR:
agar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agar03021
]
OAG1_05490 (rapA)
Transcription machinery [BR:
agar03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
OAG1_05490 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Flavi_DEAD
Cas3-like_C_2
AAA_34
CC_BshC
Motif
Other DBs
NCBI-ProteinID:
BEU01749
LinkDB
All DBs
Position
complement(583983..586901)
Genome browser
AA seq
972 aa
AA seq
DB search
MSFSIGQRWISDSESELGLGTVVAIEGRMVTLLFPASGENRFYAMADAPVTRVVFNVGDD
ITSTEDWSMTITEIEEADELIVYHGVRHDTEETVQLREMFLSHFLKFNKPQDRLFAGQVD
RFDSFVVRYQTLVKRFEQQQSELKGLMGGKVSLIPHQLYIASEVGRRISPRVLLSDEVGL
GKTIEAGLIIHQQLIAGLAKRVLIIVPDALQYQWLIEMLRRFNMHFSLFDEDRCIEAYAE
ADNPFETEQLVLCSLSFLRGSKKRFEQVAEADWDLMIVDEAHHLQWDEATPSREYQIIET
LAKQIAGVLLLTATPDQLGHQSHFARLRLLDPDRFYDYQAFTDEEQHYQPVAEAAQSLLA
SSPLSTKQANQLSELLSENDIEPLLALINDSASSYEQQQQAREELLQHLLDRHGTGRVLF
RNTRSAIEGFPMRQLASYPLSLPSQYKTALKVQQMMQGSNAGANNQLMFPEELYQQFEGE
SEGEASWCKFDPRIDWLIGFLLAHKQKKVLLICAKAATALAIEDAVRTREGIRGTVFHED
MSLIERDKAAAYFAQDEAGAQLMVCSEIGSEGRNFQFAHHIVLFDLPTNPDLLEQRIGRL
DRIGQQNDIQIHVPYLEGTPQQTLLRWYHEGLNAFEQTCPAGSAIFAEFGETLTGLLGQN
TPDEAELNTLIKETAKRYHEVKAKLDAGRDRLLEIHSSGGNKAAELIEKIQAAEQDPHFV
TFSLRLFDTIGINQDDKGENALVLHASEQMLVPSINGLPEDGCTITYDRDTALSRDEIQL
MSWEHPLIQSCIDTILGADLGTTSVALLKNRALPVGSLFVEGIFVVETSAPAEYQIERYL
PATPVRILLDKNGGNLSANVDFEQFNQQLSAVNRHLAAKLISASQTQIHPLLAQANELAQ
QQLATIVEQANEHMKQSLNGELERLEALSAVNPSIRKDELDTLRSLRDNAGDYLQKAQVK
LDALRVILVSHN
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgtcattttctatcggccaacgctggatcagtgattcagaatctgagttaggtttaggt
accgtagttgctattgaaggcaggatggttaccttgttgttccctgctagcggtgagaat
cgcttttatgctatggcggacgcaccagtaactcgagtggtatttaatgttggtgatgac
ataaccagtactgaagattggtcgatgaccattacagaaattgaagaagcggatgagttg
attgtctatcatggcgttcgtcacgatactgaagaaacggttcagctacgtgaaatgttc
ttaagccacttcctcaagtttaacaaacctcaagaccgactttttgctggccaagttgac
cgctttgatagttttgttgtgcgttaccaaaccttagtgaaacgctttgagcaacagcag
tctgagttaaaaggcttaatgggcggtaaagttagcctaattccacaccagctttatata
gcgagcgaagtaggtcgacgtatttcgcctcgggtattgctgtctgatgaagtgggttta
ggtaaaaccattgaagccggtttaattatccaccagcagcttattgcaggcttagctaaa
cgagtattgattattgtgccagacgcgctgcaataccaatggctaatagaaatgctgcgc
cgctttaacatgcactttagcttgtttgatgaagaccgctgcattgaagcttatgccgaa
gctgacaacccttttgaaaccgaacaattagtattatgtagccttagctttttacgcggc
agcaaaaaacgttttgaacaagttgccgaagctgattgggatttgatgattgtagatgaa
gcacatcacctgcaatgggatgaagcaacaccaagtcgtgaataccaaatcattgaaaca
ctggccaaacaaattgccggcgttttgctacttaccgcgacaccggaccaacttggccac
caaagtcactttgcccgtttaaggttgctcgatcctgaccgcttttacgactatcaagcc
tttacagatgaagaacagcactatcaaccggtagcggaagctgcccagtctttgctggcc
agtagcccactaagcaccaagcaagctaatcaacttagtgaactgttaagcgaaaatgat
attgagcctttgctcgcgctcataaatgacagcgcttcaagttatgaacagcaacaacag
gcgcgtgaagagttactacaacatctattagatcgccacggcacaggccgagtattgttt
agaaacacccgcagcgcgattgaagggtttccgatgcgccaattggctagctatcctctc
agcttacctagccaatataaaactgcattaaaagtacaacaaatgatgcaaggcagtaac
gctggtgccaataatcaattaatgttccccgaagagctctaccagcaatttgaaggtgaa
agcgaaggggaagccagctggtgtaagttcgacccacgtatcgactggttaattggcttt
ttactggcgcacaaacaaaagaaagtgttactaatctgcgctaaagctgctacggcgcta
gctattgaagatgcggtacgcactcgcgaaggtattcgcggtaccgtgttccatgaagac
atgtcgttaattgaacgcgataaagccgcagcttatttcgctcaagacgaagccggtgca
caattaatggtgtgttcagaaattggctctgaaggacgcaacttccaatttgctcaccat
atcgtgttattcgatttgccaacgaaccctgacctcttagagcaacgaattggtcgcctt
gaccgtattggccaacaaaacgatattcaaattcatgttccttatttagaaggtacacca
caacaaacactgttacgttggtaccatgagggtttaaacgcctttgaacaaacctgccca
gcaggctcagccatctttgctgaatttggtgaaaccttaacaggcctgcttgggcaaaac
acgccagacgaagcagaactaaacacactaataaaagaaacagctaagcgttaccatgaa
gtaaaagccaagttagatgccggtcgtgaccgcttgttagaaatacactcaagtggtggt
aacaaagctgcagaactcattgagaaaattcaagcagcagagcaagacccgcattttgtg
acgtttagcctacgtttgttcgataccatcggcatcaaccaagatgacaaaggtgaaaat
gccttggtactgcatgcgagtgaacaaatgctagtgccgtctattaatggcttgccggaa
gacggttgcaccattacttatgacagagacacagcgcttagtcgagacgaaattcaactt
atgtcttgggaacacccgctgattcaaagctgtatcgatactatcttgggggccgactta
ggcacaacgtcagtagccttactcaagaatcgcgccttaccagtaggtagcttatttgtt
gaagggatctttgtggtagaaaccagcgcacctgccgagtaccaaattgagcgatacttg
cccgctacaccggtgcgtattttgctggataaaaacggcggaaacttgtctgctaatgtt
gattttgaacagttcaatcagcagctttctgcggttaaccgccacttagccgctaagttg
attagtgcttcacaaactcaaattcatcctttgcttgcacaagccaatgagctcgcccaa
caacaattagcaactattgttgaacaagcgaatgagcatatgaagcaaagcttaaatggc
gagcttgaacgccttgaagccttaagcgcagtaaacccaagcattcgtaaagatgaatta
gataccttacgaagcttacgtgacaatgctggcgactacctacagaaagcccaagtaaaa
ttagatgcgctgcgggtaatattggtttcgcacaactag
DBGET
integrated database retrieval system
