Agarivorans sp. OAG1: OAG1_05900
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Entry
OAG1_05900 CDS
T09980
Symbol
dctD
Name
(GenBank) C4-dicarboxylate ABC transporter
KO
K10126
two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
agar
Agarivorans sp. OAG1
Pathway
agar02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
agar00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OAG1_05900 (dctD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
agar02022
]
OAG1_05900 (dctD)
Two-component system [BR:
agar02022
]
NtrC family
DctB-DctD (C4-dicarboxylate transport)
OAG1_05900 (dctD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
AAA
Mg_chelatase
AAA_16
HTH_50
FleQ
AAA_3
VpsR
AAA_22
Torsin
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BEU01790
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Position
complement(644231..645580)
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AA seq
449 aa
AA seq
DB search
MYTPVIIIDDDPDILRSLGQTLELEDYECLRFENAEQALRQIKPTWPGVIISDINMPGLS
GLEMMQQAHQIDADLPIILLTGHGDISMAIKAIRDGAYDFLEKPFSTSHLLDVLQRAIEK
RRLTLENRELKAELDAQSGPGPRILGSTPAITRMRKILSHIKDTPADVLIHGETGTGKEL
VARFLHDHSVRAKQPFVAINCGAVPETMIESELFGHEAGAFTGAQKKRIGKIAFANHGTL
FLDEIESMPMALQIKLLRVLEERSVEPLGSNQATALNIRVIAATKSDLKDLGEQGEFRSD
LYYRLNVVEVHIPALRERAEDIPLLLENFLRVAAARYQLNSPEVSPSRLAELVNHDWPGN
VRELRNLAERWVLMGEDAAFSESQNHQQSLSLMEQLYRFERTLLQDALQRHKGHLKTVQE
ELQIGRKTLYEKMKKYQLDKGDYKQVEPE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
gtgtatacaccggtaataatcattgatgacgatcccgatattttgcgctctctgggacaa
actttagagttagaagactacgaatgtctgcgctttgaaaatgccgaacaggcattacgg
caaattaaacctacctggccaggcgtgatcatttcagacatcaatatgccaggtttaagc
ggcttagagatgatgcaacaagcccatcaaattgatgccgatttaccgattattctactt
accggccatggtgatatatctatggccattaaggcgatacgcgatggtgcttatgatttc
ttagagaagcctttttccaccagccacttgttagatgttctgcaaagagccatagaaaaa
cgccgcctcaccttagaaaaccgcgaattaaaagctgaactggatgctcaaagtggccca
gggccacggatacttggctcaacgcccgcaatcacccgcatgcgcaaaattcttagtcat
attaaagataccccggcagatgtattaattcatggtgaaactggcaccggtaaagaactg
gttgcgcgctttttacatgaccatagcgtgcgcgccaaacagccttttgtggcaatcaac
tgtggtgcagtgccagaaacaatgattgagagcgagttatttggccacgaagccggcgca
tttactggagcacaaaaaaagcgcattggcaaaattgcctttgccaatcacggcacccta
tttctcgacgaaatagagagcatgccaatggcgctacagattaagctgctaagggtgctg
gaagagcgcagcgtagagccactaggcagtaaccaagccactgcgcttaatattcgcgtt
attgccgccactaaaagtgatttaaaagatctgggcgagcaaggagagtttcgcagcgat
ttgtattaccgcttaaacgttgttgaggtgcacatacccgctttacgtgaacgtgctgaa
gacattccattactattggaaaactttctgcgggtagctgctgctcgctatcagttaaat
agccccgaagtctcgccgtcacgtttagccgaattagttaaccatgactggcccggcaat
gttcgcgagctacgtaacctagctgagcgttgggtattgatgggcgaagatgcggcattt
agcgagagtcaaaaccaccagcagtcactgagtttaatggaacagctttatcgttttgaa
cgcaccttgctgcaagatgcactacagcgccataaaggccatttaaagaccgtgcaggaa
gagctacaaatcggccgaaaaaccctttacgaaaagatgaaaaagtatcaattagacaag
ggcgactacaaacaagtcgaacccgagtaa
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