Agarivorans sp. OAG1: OAG1_06010
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Entry
OAG1_06010 CDS
T09980
Name
(GenBank) TetR family transcriptional regulator
KO
K10913
TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
Organism
agar
Agarivorans sp. OAG1
Pathway
agar02020
Two-component system
agar02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
agar00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OAG1_06010
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OAG1_06010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
agar03000
]
OAG1_06010
Transcription factors [BR:
agar03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
OAG1_06010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
WH_MCM3_C
LacI
TetR_C_13
Sigma70_r4_2
MCM4_WHD
DUF3226
HTH_7
Motif
Other DBs
NCBI-ProteinID:
BEU01801
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Position
complement(656671..657288)
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AA seq
205 aa
AA seq
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MQTSTLRRRTRLSPEVRRKQLMQCAVEIFARRGIGRAGHAEIAELANVSVATVFNYFNTR
EDLVDAVLSEVEQTMLGLVEQTYPTDENAITAIQHHLSALVELAYSNSDVTHIWLEWSSS
VREDVWPRFSAVMAKINQQIGESIQSGFDSKEISSALNALQAAQAINAGLYLAVQMINRP
DSPERQEVVDFLNDFVLSLLRPPGK
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactagcaccttaagacgccgtacccggctgtcaccagaagttcgccgtaaacag
ctcatgcaatgcgctgttgaaatttttgcccgtcgtggtattggtcgtgcaggtcacgcc
gaaatcgctgaactagcaaacgtatcggtagcaactgtttttaactactttaatacccgc
gaagacctagtggatgctgttctatctgaggtagagcaaactatgttaggtttggttgag
caaacttacccaactgatgaaaatgcgattacagctatccagcatcatttgtcagctttg
gtagaactggcttacagcaactcagatgtgactcacatttggctagagtggagctcttca
gtacgtgaagacgtatggccacgttttagcgctgtaatggctaaaatcaaccaacaaatt
ggcgagagcattcaatcgggcttcgatagcaaagaaatcagtagcgcgctaaatgcttta
caagctgctcaagcgattaacgcaggattgtacctagcagtacaaatgattaatcgacca
gacagcccagagcgccaagaagttgtagatttcttgaatgactttgtattgtcactactg
cgcccaccgggtaaataa
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