Agarivorans sp. OAG1: OAG1_08340
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Entry
OAG1_08340 CDS
T09980
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
agar
Agarivorans sp. OAG1
Brite
KEGG Orthology (KO) [BR:
agar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agar03400
]
OAG1_08340 (radA)
DNA repair and recombination proteins [BR:
agar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
OAG1_08340 (radA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
ABC_tran
Rad51
RecA
AAA_22
GvpD_P-loop
AAA_14
DUF7125
SLFN-g3_helicase
Zeta_toxin
AAA_16
AAA_29
nSTAND3
AAA_24
PAXNEB
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
BEU02034
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Position
923480..924841
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AA seq
453 aa
AA seq
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MAKAKTAYVCNDCGADFPRWQGQCGECKAWNTISEVRLSAAPSRNDRFTGYAGSTAGKVQ
TLESIDLAELPRFSTGFKEFDRVLGGGVVPGSAILIGGSPGAGKSTLLLQTMCGLAQTMD
TLYVTGEESLQQIALRAQRLGLPKDKLKLLAETSVEQIGQVALEVKPKMMVIDSIQVMHM
ADIQSAPGGVSQVRESAAWLTRFAKQHNIAMFMVGHVTKDGSLAGPKVLEHCIDCSIMLE
GDADGRFRTLRGNKNRFGAINELGVFAMTEQGMREVSNPSAIFLSRGQEAAPGSVVMVVW
EGTRPLLVEIQALVDYSQMANPRRVAVGLEQNRLAMLLAVMHRHAGVQMSDQDVFTNVVG
GVRVAETGADLALLVAMVSSFRNQILPQELVVFGEVGLSGEIRPVSNGQERLNEAAKHGF
KRAIVPLGNRPKQAIAGLEVIAVSKLAEALEAV
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcgaaaacggcctatgtatgtaacgactgtggtgccgatttccctcgttgg
cagggacaatgtggtgaatgtaaagcgtggaataccattagcgaagtacgtttgagtgcc
gcgccctcacgcaatgatcgtttcaccggttatgccggcagtaccgcaggaaaagtccaa
accttagagagcatagaccttgctgagttaccgcggttttccaccggctttaaagaattt
gaccgggttctaggtggcggtgtcgtgcctggtagcgccattttaattggtggtagcccc
ggcgcaggtaaaagtactttgttgttgcaaaccatgtgtggcttagcgcaaaccatggat
accttatacgtaacgggtgaggaatcactacagcaaatcgctttgcgcgcgcagcgctta
ggtttgcctaaagacaagctaaagttactggccgaaaccagcgttgagcaaattggccag
gtggctttagaagttaaaccaaagatgatggtgattgactctattcaggttatgcacatg
gctgatattcaatcagcaccaggtggtgttagccaagtgcgagaaagtgcggcttggtta
actcgttttgccaagcaacataatatagccatgtttatggtgggccatgtaaccaaggac
ggctcgttagctgggcctaaagttctggagcactgtattgattgctcgatcatgctagaa
ggtgatgccgatggccgctttcgtaccttgcgtggtaacaaaaaccgttttggtgcgatt
aacgagctgggtgtatttgctatgaccgaacagggcatgcgagaagtgtctaacccttcg
gctattttcctttcgcgagggcaagaagcagcgcctggctcggtcgtgatggtagtgtgg
gaaggtactcgtccactattggtcgagatccaagcattggttgattacagccaaatggcg
aatcctaggcgagtagctgtaggcctcgagcaaaaccgtttggcgatgctgcttgcggta
atgcatcgccatgctggtgtgcaaatgtctgatcaagacgtatttaccaacgtggtgggt
ggtgtacgggttgctgaaactggcgccgatttagctttattggtggccatggtctctagc
tttagaaatcaaatattaccgcaagagttggtggtatttggtgaagtaggcttatcggga
gagattcgccccgtaagcaatggtcaagaacgtttgaacgaagctgctaaacacggcttt
aagcgagcgatagtgcctttgggcaatcgacctaagcaagcaatagcagggcttgaggtg
attgccgtaagtaagttggcagaagctttagaagcggtttaa
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