Agarivorans sp. OAG1: OAG1_08870
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Entry
OAG1_08870 CDS
T09980
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
agar
Agarivorans sp. OAG1
Pathway
agar03410
Base excision repair
agar03430
Mismatch repair
agar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OAG1_08870 (recJ)
03430 Mismatch repair
OAG1_08870 (recJ)
03440 Homologous recombination
OAG1_08870 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agar03400
]
OAG1_08870 (recJ)
DNA repair and recombination proteins [BR:
agar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
OAG1_08870 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
OAG1_08870 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
OAG1_08870 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BEU02087
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Position
972678..974399
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AA seq
573 aa
AA seq
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MLLRRRENLDTQALPAEWPELIKQVYVRRGVKTAADVERRAQALLPFQGLQGMDDAVNLL
ISNLQQRKKILIVGDFDADGATSTALLMAGLPQFGFRSVDFLVPNRFEYGYGLSPEIVEL
AAAKGAELIITVDNGISSINGVDKAQSLGIPILITDHHLPGEQLPKAAAIVNPNLSACAF
PSKNLAGVGVAFYLLMALRSKMREQDLFAQQGLVEPNIASLLDLVALGTVADVVPLDSNN
RILVHQGLQRIRAGACRPGIQALIEVSGRNKASMVASDLGFAIGPRLNAVGRLDDMSLGI
HCLLSDDIHHARQLASEMDSLNSERKDIEASMQQEAQQSVSKLSLDTQSLPKALCLYQAD
WHQGVVGLVASRIKEKYYRPVFAFADGDNGEVKGSGRSVAGVHLRDLLERIDTQNPGLIA
KFGGHAMAAGLSLSQSRFSEFQACLENTAKDFIDEECLTHTLLSDGELAPEQLVLEFAEM
LRESGPWGQGFPEPLFDGEFELCAQRVVGEKHLKMSVKLPGMSQEVDAIAFNVDRSIWPN
ASLKHVQLVYKLDVNEFRGRRSVQLMVEHLAPL
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
gtgttattacgccgccgcgaaaatctcgatacccaagcgctaccagccgaatggccagag
ctgataaaacaagtttatgtgcgacgcggagtaaaaaccgcggccgatgttgaacggcgc
gctcaagctcttttgccatttcaaggtttgcaaggcatggatgatgcggtcaacttacta
ataagcaatctgcagcaacgaaagaagatcctgattgttggtgactttgatgccgatggt
gcaaccagcactgcactattgatggctggcttaccgcagtttggctttcggtctgtagat
tttttagtgcctaaccgttttgagtatggttatggcttaagtccagagattgtagagcta
gccgcagccaaaggtgctgagcttattattaccgtggataatggcatttccagtatcaat
ggcgttgataaggcgcagtctcttggtattccgatacttatcaccgatcaccacttgcca
ggtgagcaattacccaaagcggcagctattgttaatccaaatctgtcggcctgcgctttt
ccaagtaaaaacctggctggcgtaggtgtagcgttttacttgcttatggcgctgcgcagc
aaaatgcgtgaacaagatttatttgcccagcaaggcttggtagagcccaatattgcgagt
ctactagatttggtagcgctaggtactgtggccgatgtagtgccgctagacagtaataac
cgaattttagtgcaccaagggctgcagcgtattcgagcaggtgcctgtaggcccggcatt
caagcgcttattgaagtgtctggccgcaataaagccagtatggtggccagtgacttaggt
tttgcaattggtccgcgcctaaacgcggttggtcgcttagacgatatgagcttaggcatt
cattgtttgcttagtgacgatattcaccacgcgcgtcaattggccagcgaaatggacagc
ttgaatagtgagcgcaaagatattgaagccagcatgcaacaagaggcccagcaaagcgtc
agcaagttgagtttagatactcaaagcctgcccaaagcactatgtttgtatcaggccgat
tggcatcaaggcgtagtagggctagtggcttcacgtattaaagaaaaatactaccgccca
gtgtttgcttttgcggatggcgataatggcgaagtaaaaggctcggggcgctcggtggct
ggagtgcaccttcgtgatctactggaacgcatagatacccaaaacccaggtttaattgct
aagtttggtggccatgcaatggctgcgggtttgtccttatcgcaatcgcgatttagcgag
tttcaagcttgtttagaaaacaccgccaaagattttattgatgaagaatgcctcactcac
accttacttagtgacggggaattagcaccagagcaattggtgttggagtttgccgaaatg
ctgcgtgaatcgggaccttggggccaaggttttcccgagcctttgtttgacggtgagttt
gagctctgtgcgcagcgagttgtgggcgaaaagcatttaaagatgagtgtgaagctaccg
ggcatgagccaagaagtggatgccattgcttttaatgtggatcgtagcatttggccaaat
gccagcctcaagcatgtgcaactggtttataagctggacgtaaatgaatttagagggcgg
cggagcgtacaacttatggttgaacacttagcccccttataa
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