Agarivorans sp. OAG1: OAG1_13120
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Entry
OAG1_13120 CDS
T09980
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
agar
Agarivorans sp. OAG1
Pathway
agar02024
Quorum sensing
agar03060
Protein export
agar03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
agar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
OAG1_13120 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
OAG1_13120 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OAG1_13120 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
agar02044
]
OAG1_13120 (ffh)
Enzymes [BR:
agar01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
OAG1_13120 (ffh)
Secretion system [BR:
agar02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
OAG1_13120 (ffh)
Eukaryotic Sec-SRP protein
OAG1_13120 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
cobW
Zeta_toxin
AAA_33
YqeC
KTI12
AAA_30
nSTAND3
AAA_16
T2SSE
AAA_14
KAP_NTPase
ParA
APS_kinase
AAA_31
Thymidylate_kin
TsaE
Helicase_RecD
ABC_tran
NACHT
ArsA_ATPase
6PF2K
AAA_19
ResIII
Herpes_Helicase
AAA_28
ATP_bind_1
AAA_17
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
BEU02512
LinkDB
All DBs
Position
1429516..1430910
Genome browser
AA seq
464 aa
AA seq
DB search
MFENLSDRLSKTLKNISGRGRLTDDNIKDTLREVRMALLEADVALPVVREFVKKVKERAL
GQEVNKSLSPGQVFVKIVQQELESAMGESNESLNLAAQPPAVVMMAGLQGAGKTTSVAKL
AKYLKEREKKKVMVVSADIYRPAAIKQLETLATEVDAIFFPSNEKQNPVDIVNGAIAEAR
TQFADVLLVDTAGRLHVDEDMMDEIKALHQAVEPVETLFVVDAMTGQDAANTAQAFNEAL
PLTGVILTKTDGDARGGAALSIRHITGKPIKFMGVGEKTDALEPFHPDRIASRILGMGDV
LSLIEEVERKVDKDQAQKLAKKVQKGKGFDLEDFREQLVQMKSMGGMMGMMDKLPGMGQV
PDSVKDQMNDKLTNQMEAIINSMTPGERQRPDIIKGSRKRRIAAGSGTQIQDVNKLLKQF
TQMQKMMKKMSGKGGMRKMMSQMKGMMPPGGMGGFGGGRGPGRF
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaacttatctgatcgactctcgaaaacgttaaaaaatatcagcggccgcggc
cgactaaccgatgacaacattaaagataccttgcgcgaagtgcgtatggccttgttggaa
gcggatgttgccttacccgtagttcgcgagtttgttaaaaaagtaaaagaacgtgctcta
ggccaagaagtaaataagagccttagccctggtcaagtattcgttaagattgttcagcaa
gagctggaatcagccatgggcgaatctaacgaaagtcttaatttggcagcccagcctccg
gcagtagtcatgatggctggtttgcaaggtgcgggtaaaaccacctctgttgctaagtta
gctaagtacctaaaagagcgcgaaaagaaaaaagtaatggtagtgagtgccgatatctat
cgtcccgctgcgattaaacagctagagactctagctacagaagttgacgctattttcttc
ccaagtaacgaaaagcaaaatccggttgatatcgttaacggtgctatcgccgaagccaga
actcaatttgcggacgtactacttgtagataccgcgggtcgtttacatgttgatgaagac
atgatggacgaaattaaagcgcttcatcaggcggttgagccagtagaaaccttgtttgtc
gtagatgcgatgactggtcaagatgcggcaaataccgctcaggcctttaacgaagctctg
ccacttaccggcgtgattttaactaaaaccgatggtgacgcgcgtggcggtgcagcttta
tctattcgccacattactggtaagccaattaagtttatgggtgtgggtgagaaaaccgat
gctctagaacctttccacccagaccgcatagcttcacgtattttaggtatgggcgatgtg
ctttctcttatcgaagaggtagagcgcaaagttgataaagaccaagcgcagaagctggct
aagaaagttcaaaaaggtaaaggcttcgatttagaagacttccgtgagcaattagtgcag
atgaaaagcatgggcggcatgatgggcatgatggacaagttgcctggcatggggcaagtt
cccgacagtgttaaagatcaaatgaatgataagcttactaaccaaatggaagcgatcatc
aactctatgacgccgggcgaacgccaacgccccgatattattaaaggctcacgtaagcgt
cgtattgctgctggttctggcacccagatccaagatgtgaacaagttgctgaagcaattc
actcagatgcaaaaaatgatgaagaaaatgtcgggtaaaggcggcatgcgtaaaatgatg
agccaaatgaaaggcatgatgcctccaggtggtatgggcggatttggcggcggtcgcgga
ccaggacgtttctaa
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