Agarivorans sp. OAG1: OAG1_13930
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Entry
OAG1_13930 CDS
T09980
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
agar
Agarivorans sp. OAG1
Pathway
agar00541
Biosynthesis of various nucleotide sugars
agar01100
Metabolic pathways
agar01250
Biosynthesis of nucleotide sugars
Module
agar_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
agar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
OAG1_13930 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
agar01005
]
OAG1_13930 (kdsA)
Enzymes [BR:
agar01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
OAG1_13930 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
agar01005
]
Lipid A
OAG1_13930 (kdsA)
BRITE hierarchy
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GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
BEU02593
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Position
1523337..1524194
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AA seq
285 aa
AA seq
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MQQKIVNIGKINVANDAPFTLFAGMNVLESRDLAMHIAEHFVEVTNKLGIPYVFKASFDK
ANRSSIHSYRGPGLEQGLRLLEEIKQQFSIPVITDVHEVAQAAPVAEVADVIQLPAFLAR
QTDLVEAMAKTGAVVNVKKPQFLSPSQMGNIVDKFAECGNEKIILCERGSNFGYDNLVVD
TLGFGTMKKVSKGSPVIFDVTHALQCRDPLGAASGGRREQVGELAKAGMATGLAGLFLEA
HPDPENAQCDGPSALPLSKLEPFLTQIKALDDLVKSFAELDTHSK
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaaaaaatcgttaatatcggcaaaataaatgtggctaacgatgcgccatttact
ttgttcgctggtatgaatgtattggaatctcgtgacttggcaatgcacattgccgagcac
tttgtagaagtgaccaacaagctaggcattccctacgtttttaaagcgtcttttgataaa
gccaatcgctcttctattcattcttatcgtggtccaggcttggagcaaggcctgcgttta
ttagaagagattaaacaacaattctctattcctgttatcaccgatgtgcatgaagttgcg
caagctgcacccgtggctgaagttgccgatgttattcaactacctgcatttttggcgcgc
caaactgacttagtggaagcaatggcaaaaaccggtgcggtagttaacgttaagaaacct
cagtttttaagcccttcgcaaatgggcaatatcgttgataagtttgctgaatgtggcaac
gaaaaaatcatcttatgtgagcgtggtagtaactttggttacgataaccttgtggtagat
accttaggttttggcaccatgaaaaaagtcagcaagggttcaccggttatttttgatgtt
actcatgctctgcaatgccgtgatccattgggtgctgcatcgggtggccgccgtgagcaa
gttggtgagttagcaaaagctggcatggcaactggccttgctggtctgttcttggaagct
catccagatccagaaaacgcgcagtgtgatggtccaagtgccttgcctttatctaagtta
gaaccattcctaacccaaattaaagccttggatgatttggttaagtcctttgctgagcta
gatacccactcaaaataa
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