Agarivorans sp. OAG1: OAG1_18330
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Entry
OAG1_18330 CDS
T09980
Symbol
rfbB_2
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K08678
UDP-glucuronate decarboxylase [EC:
4.1.1.35
]
Organism
agar
Agarivorans sp. OAG1
Pathway
agar00520
Amino sugar and nucleotide sugar metabolism
agar01100
Metabolic pathways
agar01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
agar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
OAG1_18330 (rfbB_2)
Enzymes [BR:
agar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.35 UDP-glucuronate decarboxylase
OAG1_18330 (rfbB_2)
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Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
adh_short
Motif
Other DBs
NCBI-ProteinID:
BEU03033
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All DBs
Position
2042313..2043239
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AA seq
308 aa
AA seq
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MKRVLVTGGAGFIGANLIRSLGSDFEVTVIDNLQSGAKQNLDGLDIKLIEADVCSFDFST
LAQQDEIYHLACVASPPQYQAQPLATLASCFLGTQRVLDFALQHNSKVVFTSTSEVYGDP
LESPQAESYYGNVNPLSKRACYDEGKRVAETLCFEYYSLGLEVKIARVFNTFGPYMSAND
GRVVANFINQALQGQPLTIYGDGKQTRSLIYVDDTITALRRLMALNTPSLCLVNVGNAQE
KTVLQLALDIKSTINSQLPLTYLALPEADPKRRRPCLKKSNALLGKYQTTSWQQGLQNTI
AYFSKLFG
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcgggtattggtaacggggggggccggatttattggggccaatcttattaggtct
ctaggttctgactttgaggtgacagttattgataacctacagagcggagcgaagcaaaat
ttagatggtttagatataaagctgattgaggctgatgtatgctcgtttgatttttccact
ttagctcagcaggatgaaatttatcatctcgcatgcgtcgcttctcctccgcaataccag
gctcagcccttagcaaccttagcctcctgctttttaggcactcaaagagttttagacttt
gcgttgcaacataacagtaaagtggtatttacttctacctctgaagtttacggcgatccg
ttagagtccccgcaagcagaatcatactacggcaatgtcaacccactaagcaaaagggca
tgttacgatgagggaaaacgagtagctgaaacgctttgttttgagtactactcactgggt
ttagaggtgaaaatagctcgagtttttaatacttttggcccttatatgtcagccaatgat
ggaagggttgttgctaactttattaatcaggccctacaaggacaacccttaacgatttat
ggtgatggaaagcaaactcgttctttaatctatgtggatgatacgataacggctctacgg
cgtttaatggccttgaacacgccgtcactttgcctagttaacgtaggtaatgctcaagaa
aaaacagttttgcaactagctttagatattaaaagtactatcaactcgcaattgcccctt
acctatctcgcactgccagaagctgatcctaaaaggcgtagaccttgcctcaaaaagtcc
aacgccttactaggaaaataccaaacaacctcatggcaacaaggcttacaaaatacaatt
gcgtatttctccaagctctttgggtaa
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