Agarivorans sp. OAG1: OAG1_20040
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Entry
OAG1_20040 CDS
T09980
Name
(GenBank) ABC transporter
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
agar
Agarivorans sp. OAG1
Pathway
agar02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
agar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
OAG1_20040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
agar02000
]
OAG1_20040
02044 Secretion system [BR:
agar02044
]
OAG1_20040
Transporters [BR:
agar02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
OAG1_20040
Secretion system [BR:
agar02044
]
Type I secretion system
Adhesin protein transporter
OAG1_20040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
DUF979
AAA_16
RsgA_GTPase
AAA_29
DUF3175
EI24
Motif
Other DBs
NCBI-ProteinID:
BEU03204
LinkDB
All DBs
Position
complement(2248973..2251096)
Genome browser
AA seq
707 aa
AA seq
DB search
MDKQDAWLESIEWLCKYFGLHFNKSVTVRGLPLANGKLEADYYARACVQAGLSATPIKLI
QPKQFTGLLLVVDKQQQLRIVSSITKDVVIYQNTNQPNSQQQAVADFMAETTEQAWLITP
LQNTDQRVEQLHQGKTTHWIYKALEQAKPWFRDLLVASIFINLLAMVVPLFTMNVYDRVV
PNQAFNTLWTLAIGVTIALIFDWLLRKARSNITDMAGKQIDNTISASIMEKVLGMRLENK
PQSVGAFSRQIQDFDSVRDFFTSVTLVTLVDLPFTLFFLALIAWLGGPMVFVPLAVLSGL
IVFSLIMKARIAASMEQSAKLSTQRQAELFESLTTLTELKQFNAEGVNQRKWEQTTSQMG
DWQIRSRHLSNLISHSIVTSQQVVTIGLVVIGVYRISEGLLSMGGLIAIVMLSGRAAGSI
NQLSMLILRYQQCRAAIQGLEQVMALPQEHQAEHKVQANNFEGKISFENVSFCYPEHNFN
ALSDINLQLMPGERLGLIGNAGSGKSSLISLMANQYAPSSGQISYQDIDTTLWAPTVLRQ
HIGWLGQDPVLVFGTVVQNILLGTTSLDEEKLTWAIQHSGLQAHLSRMSNGLESQVGERG
MLLSGGQRQAVALARALYHKPKLLLLDEPVSALDNNSQSLVKHSLAKLPRDMSIVISSHQ
QSLLSICDRIIVLERGHIVANDKADVILGLQSKKRHSVSVVREAKHD
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggataagcaggatgcttggctagagagcatagagtggctatgcaaatatttcggtctc
cattttaataagtcggtgactgttagaggcttaccgcttgcaaacggcaagctagaagct
gactactatgcacgagcttgtgtacaggcggggctttcagccacaccgattaaacttatt
caacctaagcaatttaccggactattgttggtggttgataaacagcaacagttacgcatt
gtctcttcgatcaccaaagatgtagttatctatcaaaacaccaaccagcctaatagccag
caacaagctgtcgcagactttatggcagaaacaaccgaacaagcttggttgatcacccca
ctgcaaaacaccgatcaaagggttgaacaattacaccaaggtaaaacaacgcattggatc
tataaggctcttgaacaagcaaaaccatggtttagagatttactggtcgcgtctatcttc
atcaatctattagccatggtagttccgttgtttaccatgaatgtttacgaccgcgtggtg
ccaaaccaagcctttaataccctatggacacttgctataggcgtaactattgcactgata
tttgattggttgctacgtaaagcgcgtagcaacatcaccgacatggcaggcaagcaaata
gataacaccatctcagcgagcattatggagaaggtattaggcatgcgtttagaaaacaaa
ccacaatcagtgggtgcgttttctaggcaaatacaagactttgatagtgttcgagatttt
tttacctcggtaactttagtcaccttggttgaccttccttttacgctttttttcttagcc
ttgattgcatggctcggtggtcctatggtgtttgttccattagctgtattaagcggttta
attgtctttagtttgataatgaaagctagaatcgctgccagtatggaacaaagtgcaaag
ctctctacccaacgacaggcagagctttttgaaagcctcactacccttaccgagctcaag
caatttaacgctgaaggcgtcaatcagcgaaaatgggagcaaacaacaagccaaatgggc
gactggcaaattcgttctcgccatctaagcaatctaatcagccactcaatagttactagc
caacaagttgtcaccattgggctggtggttattggtgtttaccgtatctcagagggatta
ctgagtatgggcggattaatcgcaattgtaatgttaagcggacgagcagctggttcaatt
aatcagttatctatgcttattttacgttaccaacaatgccgagcagcaatacaagggctc
gagcaagtgatggcattaccgcaagaacatcaagcagagcataaagtccaagcaaacaac
tttgaaggtaaaatcagttttgaaaacgtgagcttttgctatccagagcacaatttcaat
gccttaagtgacattaacctacaattaatgcctggtgagcgcttggggctaattggcaac
gcaggctctggcaagtctagccttatttcattaatggctaatcaatatgcacctagctct
ggtcaaatcagttaccaagacatcgataccacattgtgggcaccaacagtattacgccaa
cacataggctggttaggacaagacccggtattggtgtttggcacggtagtacaaaacatt
ttgctaggtaccacatcgctagatgaagaaaaactaacctgggcgattcaacattctggc
ttacaggcccatttaagcagaatgagtaacggactcgaaagccaagtgggcgaacgcggt
atgttgctatcaggaggccagaggcaagcagttgctctagcgagagctttataccataaa
cccaaactacttctactagacgagcccgtaagcgccttagataacaacagccaaagttta
gtgaaacacagcttagctaaactcccccgcgacatgagcatcgtcataagttcgcaccaa
caaagtttacttagtatttgtgatcggatcatcgtattggaaaggggccatatcgtcgcc
aatgataaggccgatgtgatcctagggcttcaaagtaaaaaacgtcactctgttagtgtg
gtaagggaggccaaacatgactaa
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