Agarivorans sp. OAG1: OAG1_29870
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Entry
OAG1_29870 CDS
T09980
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
agar
Agarivorans sp. OAG1
Brite
KEGG Orthology (KO) [BR:
agar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
agar01011
]
OAG1_29870
Enzymes [BR:
agar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
OAG1_29870
Peptidoglycan biosynthesis and degradation proteins [BR:
agar01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
OAG1_29870
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM_RLK
NMB0315_dom_I
LysM2_CERK1_LYK3_4_5
HTH_28
Motif
Other DBs
NCBI-ProteinID:
BEU04187
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Position
3353212..3354801
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AA seq
529 aa
AA seq
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MKALTVGLFSLLLGACQLTNPQVTEQLVDANAVDASEQQTKAEQVKEVEEAKVQVQPEAE
PEPQAPVYHDVWVRIEDQLAIPLPENNKRLQAQLNWFLKHPDYMRRVSVRADPYLFFIVE
EIERRQMPLELALLPIVESAFQPFAYSHGRAAGIWQIIPGTGKRFGLEQNWWYDGRRDVY
ASTHAALDYLEYLHKYFDGDWLHALAAYNSGEGRVRRAIRANANAGKATDFWSLNLPRET
RAYVPKLLALSQMLQHRDEYQLNIPEIANKAHFEKVDTYSQIDLALAADLANIKLDQLHK
LNPGFNRWATAPDGPHYLLVPKKNVPNFEVALASLSKQERMQWARYKVKSGDSLSVIAKR
YNTTSKQIRELNQLTSNTIRIGQHLLVPVSSRNQNAYTLSQSQRLASQQNKPRGDIKLNY
TVKSGDSFWSIAQKYKVSHRNIAKWNSMAPTDTLKPGKKLVIWQKSQANKNHIQTVTYKV
RNGDSLSRIAQKFKVSVTDLLKWNDLNKNHYLQPGQKLKLYINVAEVSA
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgctcactgttggccttttttctttattattgggcgcttgccaactcactaat
cctcaagttactgaacaattagtagatgctaatgctgtagacgctagcgagcagcaaact
aaagcagaacaagtaaaggaagttgaagaagcgaaggttcaggtacaaccggaagcagag
ccagagcctcaagctccggtttatcacgacgtttgggttagaattgaggaccaactggcc
attcctctgccagagaacaacaaacgcctacaagctcaacttaactggtttttaaaacac
cccgactacatgcgccgtgtatcagttagagccgacccttacttgttttttattgttgaa
gaaattgaacgccggcaaatgcctttggagctcgcgcttttacccatcgtagaaagtgct
tttcaaccctttgcatactcccatgggcgtgcagcgggaatctggcaaataatccctggt
acaggtaaacgctttggtcttgagcaaaattggtggtacgacggacgccgcgatgtatat
gcctctactcatgccgcactcgattaccttgagtatctacataaatactttgatggcgat
tggttacatgctcttgctgcctataactctggcgaaggtcgcgttcgacgtgctattcgc
gccaacgctaacgctggcaaagctactgatttttggtcgctaaacctacctagagaaact
cgcgcttatgtgcctaaactattggcactaagccaaatgttacaacatcgcgatgagtac
cagctaaatatccctgaaatcgccaacaaagcgcattttgaaaaagttgatacttatagc
caaatcgacttagcactagcggccgatttagccaatattaaacttgatcaattacataaa
ctgaacccaggttttaaccgttgggctacagcacctgatggcccgcactatttgttagtg
ccaaagaaaaatgtacctaattttgaagtagcccttgcctctttgtctaaacaagagcgc
atgcaatgggcgcgttataaagtgaagtcaggtgacagccttagtgtcatcgccaagcgt
tataacactaccagcaaacagatccgagagcttaaccagctaaccagcaatactattcgc
attggtcaacatttgttggtaccagtatcttcgcgtaatcagaatgcttacacccttagc
caaagccaacgtttagctagccaacaaaacaaacctcgtggcgacattaagctaaattac
acggtgaagtcaggggatagcttttggagcattgcgcagaaatataaggtgtcgcaccgc
aacattgcaaaatggaatagcatggcgccaaccgacactttaaaaccgggtaaaaagctg
gtgatttggcaaaaatctcaagccaataaaaaccatattcaaaccgttacctataaagta
cgcaacggagattcactgtctcgcatcgcccaaaaatttaaagtgtcagtgaccgattta
ttgaagtggaatgacctaaacaaaaatcactatttacagccaggtcagaagttaaagctg
tatatcaacgtggctgaagttagcgcttag
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