Agarivorans sp. OAG1: OAG1_29970
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Entry
OAG1_29970 CDS
T09980
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
agar
Agarivorans sp. OAG1
Brite
KEGG Orthology (KO) [BR:
agar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
agar03016
]
OAG1_29970 (truB)
Enzymes [BR:
agar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OAG1_29970 (truB)
Transfer RNA biogenesis [BR:
agar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OAG1_29970 (truB)
Prokaryotic type
OAG1_29970 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BEU04197
LinkDB
All DBs
Position
complement(3369355..3370302)
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AA seq
315 aa
AA seq
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MGQGRRKKGRAIDGILLLNKPTGVSSNGILQRVKRIYFAQKAGHTGALDPLATGMLPICL
GEATKFSQFLLDSDKRYQVTAQLGVRTNTSDSDGEVVEQRDVNVNQAEIEAALASFRGAI
NQVPSMFSALKHNGKPLYSYAREGITIEREARPITVYENNFISLDGDMLTLDVHCSKGTY
IRTIIDDLGEMLGCGAHVVKLHRSQVATYPSERMVTPEQLETLLEQANEQDIAPKELLDP
LLLPMDSAVAHLAEVNIPEALGGYLMQGQAMQVAGAPLNDVFRLTIGEQRRFVGIGQLND
DGLVAPKRLIQNSDS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgggacaaggacgcagaaaaaagggtagagctattgacggtatccttctgctgaataaa
cctactggcgtttcttcaaacggaattttgcagcgagttaagcgaatttattttgctcaa
aaagccggacataccggggctctagatccgcttgccactggtatgctgccaatttgctta
ggtgaagccactaagttttcacagtttttgttagattcagataagcgttatcaggttact
gctcaactcggtgttcgaactaatacctctgattccgatggggaagtggttgaacagcgt
gatgtgaatgttaatcaagccgagattgaagctgcattagcatcatttcgtggtgcgata
aatcaagtaccttctatgttctctgcgctaaagcataacggcaagcctttgtattcttac
gcccgtgaaggcattacgattgaacgtgaagcgcggccaattactgtttatgaaaacaac
tttatttcattagatggcgatatgctgaccttagatgttcattgcagcaaaggtacttat
attcgcaccattattgatgatctaggtgaaatgctaggttgtggtgcgcatgtagttaaa
ttgcatcgctcacaggtagcgacttacccaagcgaacgaatggtgacaccagaacagtta
gagacgttattagaacaagctaacgagcaagatattgctcctaaagagttgcttgaccct
ttattgttgccaatggattcagccgtcgcccatttggcggaagtgaatattcccgaggca
ttaggtggatatttaatgcaaggccaagcgatgcaagtcgctggcgcgccgttgaatgat
gtgttcaggctgactattggcgagcaacgtcgatttgttggaattggccagctaaacgat
gatggtttagtggcacctaaacgcttgattcaaaatagcgatagttag
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