Agarivorans sp. OAG1: OAG1_30640
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Entry
OAG1_30640 CDS
T09980
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
agar
Agarivorans sp. OAG1
Brite
KEGG Orthology (KO) [BR:
agar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agar03400
]
OAG1_30640
DNA repair and recombination proteins [BR:
agar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
OAG1_30640
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Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
DZR
AAA_22
T1R_D3-like
Zn_Ribbon_1
AAA_30
AAA_16
AAA
SLFN-g3_helicase
UPF0547
Motif
Other DBs
NCBI-ProteinID:
BEU04264
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Position
complement(3453125..3454852)
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AA seq
575 aa
AA seq
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MFQLRDYQQASVDAVLAHFRKSDDSAVLVLPTGAGKSIVIAELARLARHPILVLAHVKEL
VEQNHQKFKDYGFESGVYAAGLGLKQSQLPVTFASVQSLSRNLEAFSGYYSLLVIDECHR
VSEDDDSQYQQIIQHLKQQNPQLKVLGLTATPYRLDRGWIYQHHYHGYVRGSGQAWFKKC
IYELPMRHLIAKEYLTKPLVVDAPAARYQFDDLPQQYSEAQLDQFLAACPRVTQAICKQL
VKLAEQRKGVMVFAASVNHAKEIAHYLPEGQTAVITAATANTERDSLIEQFKRQQLKFLV
NVSVLTTGFDAPHVDLIAILRRTASVSLYQQIAGRGLRLFKDKTDCLIVDYAGNNYDLYQ
PEIGEVKPNPNSTLVQVSCPQCQFANMFWGITDKDGDVIEHYGRRCQGLVADPDEPAKQI
QCTYRYKYKQCSQCNAENDIAARQCQSCGFQLIDPDKQLKDALQLKDRKVLRCSGISASC
DGNKLKLVYHDEDGAELSESFNFDYAKAKQQFNAVFSRRVSEQAALIDDAKEAEALVTKL
VAPDFVIAKKQKHYWVIEHRIFDYQGNYRRANQQY
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaactgcgcgactaccagcaagcctcggtagatgccgttctcgctcactttcga
aaaagtgacgattccgctgtgttggtgctgccaactggtgctgggaaaagcatcgtgatt
gccgaacttgcgcgtttagcgcgtcaccctattctggtgttagcccatgtaaaagagttg
gtcgaacagaatcatcaaaagtttaaagactatggttttgagtcaggcgtttatgccgca
ggtttaggcttaaaacaaagccaacttccagttacctttgccagtgtgcagtctttaagt
cgcaaccttgaagctttttccggctactactctttgctagtgattgatgaatgtcaccgg
gtaagtgaagacgatgacagccagtatcagcaaattattcagcatttaaagcaacaaaac
ccacaactaaaagtgctaggtttaacggctactccgtaccgtttagatagaggctggatc
taccaacatcattatcacggttatgttcgtggcagcggccaagcttggtttaaaaagtgt
atttacgagctgccgatgcgccatctcattgctaaagaatacttaactaagccgctggtg
gtggatgctcccgcggcgcgttatcaatttgatgatttaccgcagcaatacagcgaggca
cagctcgaccagtttttagctgcttgcccgcgagttactcaagccatatgcaaacagttg
gttaaattggcagagcagcgtaaaggcgtaatggtgtttgctgcttctgttaaccatgcc
aaggaaattgcacactatttaccagaaggacaaactgcggtcatcaccgctgctaccgcc
aatactgagcgagacagcttaattgaacagtttaagcgccaacagcttaagtttttagtg
aatgtatcggtgttaactacgggttttgatgcgccgcatgtggacttaattgctattttg
cggcgcactgcttcggtaagcttgtatcaacaaatcgccggccgaggtttgcgtttattc
aaagacaaaaccgattgcctaattgttgattatgcaggtaataactacgatctctatcag
ccagaaattggcgaagtgaaacccaaccctaacagtacattggtacaggtaagttgcccg
caatgccaatttgccaatatgttttggggcattaccgataaagatggtgatgttattgaa
cattatggtcgacgttgccaagggttagtggcagacccagatgagccagcaaaacaaatc
caatgtacttaccgctataaatacaagcaatgctcacaatgtaatgccgaaaacgatatt
gcagcacggcaatgtcaaagctgtggctttcaattaattgacccagacaagcagcttaaa
gatgcgctgcagttaaaagaccgtaaagtgctaaggtgcagcggcatctcggctagctgc
gatggcaataaacttaaattggtttatcacgatgaagatggcgcagagcttagcgaatcc
tttaactttgattacgccaaagccaagcaacaatttaacgctgtgtttagtcgccgagtc
tctgagcaagcagctcttattgacgatgcaaaagaagcagaagcattagtaacaaaactt
gtagcccccgactttgttatcgctaaaaagcaaaagcactactgggttattgagcaccgg
atttttgattaccaaggcaattatcgaagagctaatcagcagtattag
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