Agarivorans sp. OAG1: OAG1_37140
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Entry
OAG1_37140 CDS
T09980
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
agar
Agarivorans sp. OAG1
Brite
KEGG Orthology (KO) [BR:
agar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agar03021
]
OAG1_37140 (rpoH)
Transcription machinery [BR:
agar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OAG1_37140 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
LysM3_NFP
Motif
Other DBs
NCBI-ProteinID:
BEU04914
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Position
complement(4191118..4191966)
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AA seq
282 aa
AA seq
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MDQVNASMALVPQGSIEAYIQSVNRADMLTPEREKELATRLYDEGDLTAARELVMSHLRF
VVHVAKNYAGYGLPQADLIQEGNVGLMKAVKRFDPKVGVRLVSFAVHWIKAEIHEYVLRN
WRMVKIATTKAQRKLFFNLRKSKKRLGWFSNDEVNMVAENLGVSTKDVLEMESRMSAQDQ
AFDLAADDDEREGSFAPIQYLEDKSSDVALFVEKENWEVAAANRLRAALNTLDERNAHIV
QRRWLDEDKATLQELADHYQVSAERIRQLEKNAMKKLKAAME
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagtaaatgcatctatggcgctagtcccgcaagggagcattgaagcctacatt
caatcagttaatcgcgctgatatgctcacgcctgagcgtgagaaagagcttgctactcgt
ttatacgacgagggtgatttaacagcagctcgcgaattagttatgtcgcacctacgtttt
gtagtgcatgtcgctaaaaattacgcaggttatggcttgccgcaagccgatttaattcaa
gagggcaacgtaggcttaatgaaagccgtaaaacgttttgaccctaaagtgggtgttcgt
ttggtatcttttgctgtgcattggattaaagcggagattcatgaatacgtattacgtaat
tggcgtatggttaaaattgctaccactaaagcacaacgtaagttgttctttaatcttcgt
aaatctaaaaagcgtttaggctggtttagtaatgacgaagtaaacatggtggctgagaac
cttggtgtaagcaccaaagacgtattggaaatggaatctcgaatgagtgcccaagaccaa
gcctttgatttagccgccgatgatgatgagcgtgaaggcagttttgcgccgattcagtac
ttggaagataagtcttctgatgtagccctgtttgttgaaaaagaaaactgggaagttgct
gcagctaatcgcttaagagccgctttaaataccctagacgagcgaaatgcgcatattgtg
cagcgccgttggttagatgaagacaaagccactttgcaagaattggcagatcattaccaa
gtttctgcagagcggattaggcagctagaaaaaaatgccatgaagaagctcaaagcagcc
atggaataa
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