Agarivorans sp. OAG1: OAG1_37450
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Entry
OAG1_37450 CDS
T09980
Symbol
recD
Name
(GenBank) RecBCD enzyme subunit RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
agar
Agarivorans sp. OAG1
Pathway
agar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OAG1_37450 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agar03400
]
OAG1_37450 (recD)
Enzymes [BR:
agar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
OAG1_37450 (recD)
DNA repair and recombination proteins [BR:
agar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OAG1_37450 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
SH3_13
AAA_11
Helicase_RecD
UvrD-helicase
AAA_22
AAA_16
AAA_28
SLFN-g3_helicase
UvrD_C
MobB
NACHT
Mg_chelatase
NTPase_1
nSTAND3
AAA_24
AAA_5
AAA_7
T2SSE
CbiA
Motif
Other DBs
NCBI-ProteinID:
BEU04945
LinkDB
All DBs
Position
complement(4226214..4228271)
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AA seq
685 aa
AA seq
DB search
MTSLLVNDVSLLSATDWLQQLKQQGQISALDFHFAKSFASSEQADVLMVAAALVSNELQA
GHVCIDMPSLAKRCEQLGACPLAGALEPEFWQVQLGFSTAVMQAELSRDAKPLVLQYGRL
YLYRYWNYEQQIADYFGENSLTSDYPLAKIQQQAEQLFSPNWQMLLQAKAAYTPQQMALY
AQQYLDVSDANLLNNAEFLSKLAGIEQVSELQSLVAKITNTSKINWQKLAALQACYQPRL
VISGGPGTGKTTTVTRLLALLQDLQLSAEKAALHIQLVAPTGKAAARLSESIIGAKQQLN
ASEQTIATIPEQASTIHRLLGVIPGRAEFRHHADNPLALDLLVVDEASMIDMPLMVKLLA
AMPKQARIILLGDKDQLASVEAGAVLGDLCAFIEQGYSQTLLDNLQASSGFNLSAWQAKQ
PLPIADKLCLLRKSYRFDAHSGIGLLAAAVNQGQVKQTMALLELRREDLPYQTLNQDSYQ
HLLGQSAKAYQPYLEALRQGLPMEQVFAEFHQFQLLVALRNGDLGVTGLNQRIEKRLNQQ
GFITLPKHADSVWYAGRPVMIEQNDHEQQLYNGDIGICAQDENGQLMVAFESANGLRWLL
PSRLPAHQSVYAMTVHKSQGSEFKQVCMLLPPATQALVNRELLYTAITRAKTTFSLYADA
ESISAACRNKTQRRSGLVERLAVGE
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgactagtttactggttaatgatgtcagccttctaagcgctactgattggctccaacag
ttaaaacaacagggacaaatcagcgccttagattttcactttgctaagtcgtttgcaagc
agcgaacaggcagatgttttgatggttgcagccgcgctggtaagtaatgaattacaagcc
ggccatgtttgtatagatatgcctagcctagccaagcgttgtgaacaattgggcgcttgc
ccacttgctggcgcgctagagcctgagttttggcaagtgcaacttgggttttcaacggca
gtaatgcaagccgaattatccagagatgctaagccattggtattgcagtatgggcgctta
tatttgtatcgatattggaactatgagcagcaaattgccgattacttcggtgaaaactca
cttaccagtgattaccccttagccaaaatacaacagcaagcggagcaattgtttagccct
aactggcaaatgctattacaggctaaagccgcttatactccgcaacagatggctttatat
gcccagcaatatttggatgtaagtgacgcgaacttgcttaataatgccgagttcttaagc
aaactcgctggtattgaacaagtatcagaactgcaaagcctagtcgctaaaattacgaat
actagcaagataaattggcagaagctggcagccttgcaagcctgttaccaacctcggcta
gtgattagtggcgggccgggcaccggcaaaaccaccaccgtgacgcgcttgctcgcctta
ttacaagatttacaacttagtgcagaaaaagcggcgttacacattcagctggttgcacca
acgggtaaagctgccgcgcgcttaagtgaatctattatcggcgcaaaacagcagcttaat
gcgagcgagcaaaccatagcgactatccctgagcaagcttctacgattcaccgcttgtta
ggtgttatacctgggcgggcggagtttcgtcatcatgccgacaatcctttagctttagat
ttattagttgtagatgaagcgtcgatgattgatatgccacttatggtgaagctattggcg
gccatgcctaaacaggcgcgaattatattgttgggagataaggaccaactggcttcggta
gaggcgggggcagtattgggggatttatgtgcctttattgagcagggttacagccaaacc
ttgctggataatttgcaagccagtagtggttttaacttaagtgcttggcaagctaagcag
cctttgcccatagctgataagctgtgtttattgcgtaaaagctatcgctttgatgctcat
tcaggcatcggtttgttggcagctgcggtaaaccaaggccaagttaaacaaactatggct
ttgctggaattacgccgcgaagacttaccctatcaaacgctaaatcaagacagttaccag
cacttgcttgggcaaagcgctaaggcttaccagccctatttagaggcgttgcgtcaaggt
ttaccgatggagcaggtgtttgccgagtttcatcagtttcagcttttagttgcacttcgt
aatggtgatttgggtgtgactgggcttaatcaacgcatcgagaaacggctaaaccagcaa
ggttttattaccttgccaaaacatgccgatagcgtgtggtatgccggtagaccagtgatg
attgagcaaaacgatcacgagcagcagctgtacaacggcgatattggcatttgtgcgcaa
gatgaaaatggccagctaatggtggcttttgagtctgccaatggtttgcgctggttattg
cctagtcgcttacctgctcaccaaagtgtttacgccatgacggtacataaaagccaaggt
agcgaatttaaacaggtttgtatgttgctgccgcctgccacccaagcgttggtaaatcga
gagttgttgtataccgcaatcacccgcgcaaaaactacctttagtttatatgccgatgcc
gagagcataagtgcagcatgtcggaataaaacccagcggcgctcgggcttggtagagcgc
ttggctgttggtgagtaa
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