Agarivorans sp. OAG1: OAG1_39010
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Entry
OAG1_39010 CDS
T09980
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
agar
Agarivorans sp. OAG1
Pathway
agar00730
Thiamine metabolism
agar01100
Metabolic pathways
agar01240
Biosynthesis of cofactors
Module
agar_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
agar00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
OAG1_39010 (thiC)
Enzymes [BR:
agar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
OAG1_39010 (thiC)
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
BEU05101
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Position
complement(4409147..4411084)
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AA seq
645 aa
AA seq
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MSRRETRAAAEQYINNLQGQPFPNSEKIYIQGSRDDIQVAMRQINLSDSLVGGTKEEPTF
EPNEPVRVYDTSGIYTDENAELDVHKGLPQLRKAWIEERGDTEELAGLSSNFSQQRLADE
GLDHIRFENLPTPRKAKLGKTVTQLHYARQGIVTPEMEYIAIRENMGRDKIREELLAEQQ
KGHSFGASLPEHITGEFVRDEVARGRAIIPSNINHAEAEPMIIGRNFLVKVNANIGNSAV
TSSIEEEVEKLVWASRWGADTVMDLSTGRYIHETREWVIRNSPVPIGTVPIYQALEKVNG
VAEDLTWEVFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSIMAKWCLA
HHKESFLYERFREICEICAAYDVSLSLGDGMRPGSIADANDEAQFAELETLGELTKVAWE
YDVQVIIEGPGHVPMQMIKENMEKQLEECHEAPFYTLGPLITDISPGYDHFSSGIGAAMI
GWFGCAMLCYVTPKEHLGLPNKEDVKQGMIAYKIAAHAADLAKGHTGAQIRDNAMSKARF
EFRWEDQFNLALDPDTARAYHDEALPQESAKVAHFCSMCGPKFCSMKISQEVRDYANELE
IKMIDEPLADLGFVADGMAEKSAEFRNKGAEIYHSPLRAETSDEV
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagacgcgaaactcgagctgcagcagaacaatacattaataacctgcaaggccaa
ccttttccaaattcagaaaaaatctatattcagggaagtcgtgacgatatccaagtagcc
atgcgccaaattaacctgtctgacagtttagttggcggcaccaaagaagaacctaccttt
gagcctaacgagccggtacgtgtttacgatacttcgggtatctacaccgacgaaaacgca
gagttagatgttcataaaggtttgccacaattgcgtaaagcttggattgaagagcgtggt
gatactgaagagttagctggtttaagctctaacttctcgcagcaacgcttggcagatgaa
ggccttgatcatattcgtttcgaaaacctaccaacgccacgtaaagctaaattaggcaaa
accgtcacccagttgcactacgctcgtcaaggcatcgttaccccagagatggagtacatt
gctattcgtgaaaacatgggccgcgacaaaatccgtgaagagttgttagccgagcaacaa
aaaggccactcctttggtgcctcattgccagagcacatcactggtgagtttgttcgtgat
gaagtggcacgaggccgcgcgattattccgtctaacattaaccacgccgaagccgagcca
atgattattggtcgtaacttcttggttaaagtgaatgccaacattggtaactcagcggta
acttcttcgattgaagaagaagttgaaaagctagtatgggcaagccgttggggcgccgat
acggtaatggatttatctactggccgttatattcacgaaacccgcgaatgggtgattcgt
aactctcctgtgccaattggtactgtgcctatttaccaagccttagaaaaagtgaacggc
gttgccgaagaccttacttgggaagtgttccgcgacacgctgattgagcaagccgaacaa
ggggtggattacttcacgattcacgcaggtgtattgctgcgttacgtaccaatgaccgcg
aagcgagttactggcattgtatcgcgtggcggttcaattatggctaagtggtgtttagcc
caccataaagaaagcttcttgtatgagcgttttcgtgagatttgtgaaatttgtgccgcc
tacgatgtatcactgtcgctaggtgatggcatgcgtcctggctcgattgccgacgccaac
gatgaagcacaatttgccgaactagaaaccttaggtgagctaacgaaagtggcttgggaa
tacgatgttcaagtgattatcgaaggccctggccatgtgccaatgcaaatgattaaagag
aacatggagaagcaattagaagagtgtcatgaagcaccgttctatacgcttggtccatta
atcaccgacatctctcctggctacgatcacttttcatcgggtattggtgctgcaatgatc
ggttggtttggttgtgccatgttgtgttacgtaacccctaaagaacacttaggtttacct
aataaagaagacgtgaagcaaggcatgattgcgtataaaatcgctgctcatgcggctgat
ttagctaaaggtcatactggtgcgcaaattcgggataatgcgatgagtaaagcgcgtttc
gagttccgctgggaagaccaattcaacctagccttagacccagacactgcgcgtgcctat
cacgatgaagctttaccacaagagtcggctaaagtggctcacttttgttcaatgtgtggg
cctaagttctgctcaatgaaaatctctcaagaagtgcgtgattatgccaacgagctggaa
attaaaatgattgacgagccattggccgatttaggttttgtggccgacggtatggcagaa
aaatctgctgaatttagaaacaaaggtgccgagatttaccactcgccactgcgcgccgag
accagcgatgaagtttaa
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