Agarivorans sp. OAG1: OAG1_40090
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Entry
OAG1_40090 CDS
T09980
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
agar
Agarivorans sp. OAG1
Pathway
agar00300
Lysine biosynthesis
agar00470
D-Amino acid metabolism
agar01100
Metabolic pathways
agar01110
Biosynthesis of secondary metabolites
agar01120
Microbial metabolism in diverse environments
agar01230
Biosynthesis of amino acids
Module
agar_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
agar00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
OAG1_40090 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OAG1_40090 (lysA)
Enzymes [BR:
agar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
OAG1_40090 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
BEU05209
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Position
complement(4532756..4534009)
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AA seq
417 aa
AA seq
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MDFFSYQNEHLHAEQCSVADLASTYGTPLYVYSRATIERHWKAFDKAAGERPHLICYAVK
ANSNLAVLNIMARMGSGFDIVSGGELARVIEAGGDPSKVVFSGVAKTEAEIADALNNGIH
CFNVESEPELDRISRVAQSLGKQAPISLRINPDIDAGTHPYISTGLKENKFGIAIERALE
AYAYAASLPGLKLVGVDCHIGSQLTEISPFVEAIDKLLALIDQLAERGIVIEHLDVGGGL
GVNYDDEVPPEPADYASALAERLGDRKLKLLFEPGRAIMANAGILVSKVEFLKMSESKNF
AIVDAAMNDLLRPALYSAWQRIVPVINKPELAMASYDVVGPVCETGDFLGKDRELAIEPN
DYIAVRSAGAYGFTMSSNYNSRCRAAEVMVDGDKVHLVREREVLASLWAGETLLPEG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttggatttttttagttatcaaaacgagcacttacatgcagaacaatgctcggtagctgat
ttagcaagtacttatggtacgcctctatacgtatattctcgcgccactattgagcgtcat
tggaaggcttttgataaagcggcgggcgaacgtccacatttgatctgttatgcagtaaaa
gccaactctaatcttgcagtattgaacattatggctcgcatgggttcgggtttcgatatt
gtctctggcggcgaattagcccgagtgattgaagctggtggcgatcctagtaaagttgtg
ttttctggtgtggcaaaaaccgaagccgaaatcgctgatgcacttaataacggcattcac
tgtttcaacgttgagtctgagccagagctagaccgtattagtcgcgtggcccaaagcctt
ggcaaacaagcgccaatttctttgcgtattaatccagatatcgacgcgggtactcaccct
tatatttctaccggccttaaagaaaacaaatttggcattgccatcgagcgcgctcttgaa
gcctacgcttatgcagccagtttaccgggcttgaagttagttggcgtagattgtcatatt
ggctctcagctcaccgagatttctccttttgtagaagccattgataagttgcttgccctc
atcgaccagttagccgagcgaggcattgtgattgagcacctagacgtaggtggcggctta
ggcgttaattacgatgatgaagtaccgccagagcctgctgattacgccagtgctttagcc
gagcgtttaggcgatcgtaaactcaagctattgtttgagcctggccgtgcaatcatggcc
aatgctggcatcttggtctctaaagttgagttcttaaaaatgtcggagagtaaaaacttc
gccattgttgatgccgcaatgaatgacttattgcgccctgccttatacagcgcttggcag
cgaattgttcctgttattaacaagccggaactggctatggccagctacgatgtggtggga
cctgtgtgtgaaactggcgactttttgggtaaagatcgcgaattggccatcgaacctaat
gattacattgcagtgcgctctgccggagcctacggtttcaccatgagctctaattacaac
tcgcgctgtcgcgccgccgaagtaatggtagatggcgacaaagttcacctagtgcgcgag
cgtgaagttttagcatcactttgggccggcgaaacgctgctgcctgaaggataa
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