KEGG   Agarivorans sp. OAG1: OAG1_40090
Entry
OAG1_40090        CDS       T09980                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
agar  Agarivorans sp. OAG1
Pathway
agar00300  Lysine biosynthesis
agar00470  D-Amino acid metabolism
agar01100  Metabolic pathways
agar01110  Biosynthesis of secondary metabolites
agar01120  Microbial metabolism in diverse environments
agar01230  Biosynthesis of amino acids
Module
agar_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:agar00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    OAG1_40090 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    OAG1_40090 (lysA)
Enzymes [BR:agar01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     OAG1_40090 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N DUF1955
Other DBs
NCBI-ProteinID: BEU05209
LinkDB
Position
complement(4532756..4534009)
AA seq 417 aa
MDFFSYQNEHLHAEQCSVADLASTYGTPLYVYSRATIERHWKAFDKAAGERPHLICYAVK
ANSNLAVLNIMARMGSGFDIVSGGELARVIEAGGDPSKVVFSGVAKTEAEIADALNNGIH
CFNVESEPELDRISRVAQSLGKQAPISLRINPDIDAGTHPYISTGLKENKFGIAIERALE
AYAYAASLPGLKLVGVDCHIGSQLTEISPFVEAIDKLLALIDQLAERGIVIEHLDVGGGL
GVNYDDEVPPEPADYASALAERLGDRKLKLLFEPGRAIMANAGILVSKVEFLKMSESKNF
AIVDAAMNDLLRPALYSAWQRIVPVINKPELAMASYDVVGPVCETGDFLGKDRELAIEPN
DYIAVRSAGAYGFTMSSNYNSRCRAAEVMVDGDKVHLVREREVLASLWAGETLLPEG
NT seq 1254 nt   +upstreamnt  +downstreamnt
ttggatttttttagttatcaaaacgagcacttacatgcagaacaatgctcggtagctgat
ttagcaagtacttatggtacgcctctatacgtatattctcgcgccactattgagcgtcat
tggaaggcttttgataaagcggcgggcgaacgtccacatttgatctgttatgcagtaaaa
gccaactctaatcttgcagtattgaacattatggctcgcatgggttcgggtttcgatatt
gtctctggcggcgaattagcccgagtgattgaagctggtggcgatcctagtaaagttgtg
ttttctggtgtggcaaaaaccgaagccgaaatcgctgatgcacttaataacggcattcac
tgtttcaacgttgagtctgagccagagctagaccgtattagtcgcgtggcccaaagcctt
ggcaaacaagcgccaatttctttgcgtattaatccagatatcgacgcgggtactcaccct
tatatttctaccggccttaaagaaaacaaatttggcattgccatcgagcgcgctcttgaa
gcctacgcttatgcagccagtttaccgggcttgaagttagttggcgtagattgtcatatt
ggctctcagctcaccgagatttctccttttgtagaagccattgataagttgcttgccctc
atcgaccagttagccgagcgaggcattgtgattgagcacctagacgtaggtggcggctta
ggcgttaattacgatgatgaagtaccgccagagcctgctgattacgccagtgctttagcc
gagcgtttaggcgatcgtaaactcaagctattgtttgagcctggccgtgcaatcatggcc
aatgctggcatcttggtctctaaagttgagttcttaaaaatgtcggagagtaaaaacttc
gccattgttgatgccgcaatgaatgacttattgcgccctgccttatacagcgcttggcag
cgaattgttcctgttattaacaagccggaactggctatggccagctacgatgtggtggga
cctgtgtgtgaaactggcgactttttgggtaaagatcgcgaattggccatcgaacctaat
gattacattgcagtgcgctctgccggagcctacggtttcaccatgagctctaattacaac
tcgcgctgtcgcgccgccgaagtaatggtagatggcgacaaagttcacctagtgcgcgag
cgtgaagttttagcatcactttgggccggcgaaacgctgctgcctgaaggataa

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