Agathobaculum sp. NTUH-O15-33: RWV98_07945
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Entry
RWV98_07945 CDS
T09495
Symbol
pepV
Name
(GenBank) dipeptidase PepV
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
agat
Agathobaculum sp. NTUH-O15-33
Pathway
agat00300
Lysine biosynthesis
agat01100
Metabolic pathways
agat01120
Microbial metabolism in diverse environments
agat01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
agat00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RWV98_07945 (pepV)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
agat01002
]
RWV98_07945 (pepV)
Enzymes [BR:
agat01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
RWV98_07945 (pepV)
Peptidases and inhibitors [BR:
agat01002
]
Metallo peptidases
Family M20
RWV98_07945 (pepV)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Flg_hook
Motif
Other DBs
NCBI-ProteinID:
WNX86192
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All DBs
Position
complement(1556668..1558032)
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AA seq
454 aa
AA seq
DB search
MDFKAYLRQHQDDLLADLASLIRIPSVEGPAENGAPYGAEVRRSLDQMLALCEKLGFPAT
DMDGRVGWCEYGEGEEMVAILGHLDVVPAGDGWTREPFGGQIENGRIYGRGTMDDKGPTV
AALYALAALKDAGAPLSRRIRLLFGTNEETGCQDMKYYLEKGGEIPVMGFTPDGEYPIIN
GEKGIMNCSYSRKLRQNGAYHLRRIEGGTASNVSPAFAFAELSCPPEAADRIHADKVTAT
PIQGGIRVEAQGVSAHGSTPEQGENAIGRLAQALLQLPLTEGDVKDTLTFLAERIGMETR
GEHLGLAMRDELSGDLTVNLGVIRGGEDEVSVTLSVRYPVTRTFDEAAPPLRSAFAEAGF
TETEMRHKAAIYMPPESELIAKLSRVYEAETGDKAVLKSIGGGTYAKSIPNLVAFGPIFP
GDEVREHKPDEYMEVERLLQNAEIIASAMFELAK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggattttaaagcttatctccggcagcatcaggacgacttgcttgccgatctagcgtcg
cttatccgcatccccagcgtcgaaggcccggcggagaacggcgcgccctacggggccgag
gtccggcgaagtcttgaccagatgctggcgctttgcgaaaagctgggctttccggccacc
gatatggacgggcgcgtgggctggtgcgagtatggcgagggcgaggaaatggtggccatt
ctgggccatttggacgtcgttcccgcgggcgacggctggacgcgcgagccttttggcggc
cagatcgaaaacggccgcatatatgggcgcggcaccatggacgataaaggccccaccgtg
gcggcactgtacgcgctggccgcgttaaaggatgcgggcgcgccgctttcccgccgcatc
cgtctgctgttcggcaccaatgaggagaccggctgtcaggatatgaagtactatttggaa
aagggcggcgaaatccccgtcatgggctttacgccggatggcgaatatccgatcatcaac
ggtgaaaagggcatcatgaactgctcttacagccgcaagctgcgccaaaacggcgcgtat
cacctgcgccggatcgagggcggcacggcgtccaacgtgtcccccgccttcgcctttgcc
gaactctcctgcccgcccgaagcggcggatcggatacatgccgataaagtgaccgcaacg
ccgatccaaggcggcatccgtgtggaagcgcagggtgtttcggcgcatggctccacgccc
gagcaaggcgaaaacgccattggccgtctggcgcaggcgcttttacaactgccgctgacc
gaaggcgatgtaaaggacacgctgacctttttggcggagcgcatcggcatggaaacgcgc
ggcgagcatttgggtcttgccatgcgcgatgagctttcgggcgatctgaccgtcaaccta
ggtgtgatccgcggcggcgaggacgaggtatccgtcacgctttccgtgcgctaccccgtt
acgaggaccttcgacgaagccgcgcccccgctgcgctcagcctttgccgaagcgggcttt
accgagaccgaaatgcgccacaaggctgccatttatatgccgcccgaaagcgaattgatt
gcaaagctatcccgcgtttacgaagccgagaccggcgacaaagcggttttaaaatccatc
ggcggcggcacctatgccaagtcgatcccgaatctggtggcctttgggccgatttttccg
ggcgacgaggtgcgcgagcacaagccggatgagtatatggaggttgaacgcctgctgcaa
aacgccgagatcatcgcctcggccatgttcgagctggcgaagtaa
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