Agathobaculum sp. NTUH-O15-33: RWV98_08380
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Entry
RWV98_08380 CDS
T09495
Name
(GenBank) penicillin-binding transpeptidase domain-containing protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
agat
Agathobaculum sp. NTUH-O15-33
Pathway
agat00550
Peptidoglycan biosynthesis
agat01100
Metabolic pathways
agat01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
agat00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RWV98_08380
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RWV98_08380
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
agat01011
]
RWV98_08380
Enzymes [BR:
agat01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RWV98_08380
Peptidoglycan biosynthesis and degradation proteins [BR:
agat01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RWV98_08380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Hpr_kinase_C
Motif
Other DBs
NCBI-ProteinID:
WNX86270
LinkDB
All DBs
Position
1639863..1641926
Genome browser
AA seq
687 aa
AA seq
DB search
MVNKNQLLRRLIALACVLLVCASLAGWKLTQLQLVHGEENVKKAAVHLTTITTVSAARGE
ILDRYGRPLVTNRTAFSMVLTYSNWQTEGQFDRLLELTRMVEADGGEVKDVMPISKTAPY
TFTAENADEAMTKLRKYMAESENKIHVGNTATAPEFIEAMRVYLKLPDTYSQQDVRTVVG
LYYSMRTVGFDMRQNFTLATDVTVDLIAKVKENHKKYAGVDFQTESVRQYDTEYAAHLLG
TVHPMWTEDWDGEDGKPGYKEDPRYNMNDSVGDSGIEKAMESYLHGTSGSATVETTLGGD
NLSGQTNSYAPEPGNNVVLTIDLELQKAAEQSLAENVSGYGHGGAAVVLDVHSGEVLAMA
SYPTYNLATFNKEYDELKKDSRKPFTNRATSGLYAPGSTFKVLSAIAALETGVIDENTSF
TCTGVFEYGGQKFECNNHEHPATYDVVNAIKYSCNTFFYNVGQQLTGAALEKWCKSFGLG
QVTGIEVGEAAGQAAGPETREKMLDNDPTLREWQGGDDVQAAIGQSDNWFTPLQLCNYIA
AVVNGGTVYKPTLVKNVKSYDYGEVVKTDEPEVLGNVTFSDKTRDTVMTGMAEVTAEGGT
AATVFADYPIKIGGKTGTAETNDPEKSNGVFVAFGPFEDAQIAVCVVGEAAQHGASVAPV
VRDIFDAYFKTEPDLVETVEKENALLN
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggtgaataaaaatcaactgctgcgccgcttgatcgcgcttgcctgcgtgcttctggtg
tgcgcctcgctcgccggatggaagctgacgcagttgcagctagtccacggcgaggaaaac
gtgaaaaaggcagcggtgcacctgacgacgatcacgacggtctccgccgcgcgcggcgaa
atactggatcgctacggccgtcctctcgtgaccaaccgcacggccttttccatggtgctg
acctattctaactggcagaccgagggccaattcgaccgcctgctggagctgacgcgcatg
gtcgaagcggacggcggcgaagtcaaggacgtgatgccgatctcgaaaaccgcgccctat
acctttacggcggaaaacgcggatgaggcaatgacaaagctgcgtaagtatatggcggaa
agcgaaaataagatccatgtcggcaataccgcgaccgcgcccgagtttatcgaagccatg
cgggtgtatttgaaattgccggatacttattcccagcaggatgtgcgtacggtggtaggc
ctttattacagcatgcgcacggtcggctttgatatgcggcaaaactttacgttggcgacc
gatgtcacggtcgacctgatcgcaaaggtaaaggaaaaccacaaaaagtacgcgggcgtt
gattttcagaccgagtccgtgcggcaatatgataccgaatacgccgcgcacctgcttggc
accgttcacccgatgtggaccgaggactgggacggcgaggacggcaaaccgggttataaa
gaggatccccgttacaacatgaacgattcggtaggcgattccggcattgaaaaggcgatg
gaatcctacctgcacggcacctccggttccgccacggtggagaccacgctcggcggcgat
aatctcagcggacaaacgaactcctatgcgcccgagccgggcaacaacgtggtgctcacc
atcgatctggagctgcaaaaagcggcggagcagtcgctggcggagaatgtgtccggctac
ggccacggcggcgcggccgtcgtgctcgacgtgcactcgggcgaggtgctggccatggcc
tcgtatccgacctataacctcgcgacctttaacaaggagtacgacgagttaaagaaagat
agccgaaagccctttaccaaccgcgccaccagcggtctgtacgcgccgggttccaccttt
aaggtgctttccgccatcgcggcgctggagaccggcgtgatcgatgaaaacacatcgttt
acctgtacgggcgtttttgaatacggcggacagaaatttgagtgtaataaccatgagcat
ccggctacctatgatgtggtcaacgcgatcaaatattcgtgcaacacattcttctacaac
gtaggccagcagctgacgggcgcggcgcttgaaaaatggtgcaaaagttttggtctgggt
caggtgaccggtattgaggtgggcgaggcggcaggtcaggccgccggcccggaaacccgc
gaaaaaatgctggataacgacccgacgctgcgcgagtggcagggcggcgacgacgtacag
gcggccatcggccagtcggacaactggttcacgcccttgcagctttgcaattatatcgcg
gcggtcgtcaacggcggcacggtctataagccgacgctggtcaaaaacgtgaagagctac
gattacggcgaggtcgtcaagaccgatgagccggaggtcctcggcaatgtcaccttttca
gacaagacgcgcgataccgttatgaccggcatggccgaggttaccgccgagggcggcacc
gccgccaccgtgttcgccgattatccgatcaagatcggcggcaagaccggtacggcggaa
accaacgacccggaaaagtccaacggtgtgtttgtggcctttggtccgtttgaggatgcg
cagatcgcggtgtgcgtggtgggcgaggccgcgcagcacggcgcgtcggtcgctccggtc
gtgcgcgatattttcgacgcctacttcaagaccgagccggatttagtggaaacggtggag
aaggagaacgcgcttttaaactaa
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