Agathobaculum sp. NTUH-O15-33: RWV98_09490
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Entry
RWV98_09490 CDS
T09495
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
agat
Agathobaculum sp. NTUH-O15-33
Pathway
agat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RWV98_09490 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agat03400
]
RWV98_09490 (ruvB)
Enzymes [BR:
agat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RWV98_09490 (ruvB)
DNA repair and recombination proteins [BR:
agat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RWV98_09490 (ruvB)
RecFOR pathway proteins
RWV98_09490 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_16
DUF815
AAA_18
AAA_14
NB-ARC
nSTAND3
TsaE
RNA_helicase
Sigma54_activ_2
IstB_IS21
AAA_17
AAA_3
AAA_24
Rad17
AAA_2
AAA_25
AAA_28
Resolvase
Motif
Other DBs
NCBI-ProteinID:
WNX86477
LinkDB
All DBs
Position
1873984..1875024
Genome browser
AA seq
346 aa
AA seq
DB search
MSIEFSGGMTDDERIISSRPLDGDETDPSLRPKTMADYVGQTKAKENLQVYIEAAKLRGE
SLDHTLLYGPPGLGKTTLAGIIAAEMGVNIRVTSGPAIEKAGDLAALLTNLSENDILFID
EIHRLDRSVEEILYPAMEDYALDIIIGKGPSARSIRLDLPKFTLIGATTRAGQMTSPLRD
RFGVLLRLELYSPEELCRIVERSAGILNVPCEHEGALEIARRSRGTPRIANRLLRRVRDF
AQVRGQGTIDKKNADIALRALEIDELGLDNIDRRMLQSIILNYGGGPVGLDTLAATIGEE
SITLEDVYEPYLMQIGFLSRTPRGRCVTLQAYRHLEMEPADGQQMM
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
ttgagtatagaattttccggcggtatgacggatgacgagcgcatcatctcatcccgcccg
ctggacggcgacgagaccgatccctccctgcgccccaaaaccatggcggactacgtcggc
caaaccaaggcgaaggaaaatttacaggtttacatcgaagcggcaaagctgcgcggtgaa
tcgctcgatcacacgctgctgtacggcccgcccggccttggcaagaccacgctcgccggt
atcatcgctgctgagatgggcgttaacatccgtgtgaccagcggtccggcgatcgaaaaa
gcgggggatttggcggccttattgacaaatctttcggaaaatgatattttgtttatcgac
gagatccatcgtctcgaccgcagcgtggaagagatactctatccggcgatggaggattac
gcgctcgatatcatcatcggcaagggcccttcggcccggtcgatccggctcgacctgccg
aagtttacgctcatcggcgcgaccacgcgggcggggcagatgacctcgccgcttcgcgac
cgtttcggcgttttgctccggttggagctgtattcgccggaggagctgtgccgcatcgtc
gaacgctcggccggtatcctaaacgtgccttgcgagcacgaaggcgctttagagatcgcg
cgccgcagccgcggcacgccacgtatcgccaaccgtctgctgcgccgtgtgcgcgatttc
gcgcaggtgcgcgggcaggggacgatcgataagaaaaacgccgatatcgcgctgcgcgcc
ctagagattgacgagcttgggcttgacaacatcgaccggcgcatgctgcaaagcattatc
ttaaactatggcggcggcccggtcggtctcgacacgctggccgcgaccatcggcgaagaa
tcgatcacgctggaggacgtgtacgagccgtatctcatgcagatcggttttctcagccgc
acgccccgcgggcggtgcgtgacgctgcaagcttaccgccatctggaaatggaaccggcg
gacgggcagcaaatgatgtag
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