Agathobaculum sp. NTUH-O15-33: RWV98_10420
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Entry
RWV98_10420 CDS
T09495
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
agat
Agathobaculum sp. NTUH-O15-33
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
HTH_1
AAA
PAS_7
HTH_23
HTH_30
PAS
HTH_29
HTH_11
ATPase
AAA_2
DUF134
PAS_8
HTH_24
bpMoxR
NUMOD1
AAA_16
HTH_Crp_2
PAS_4
Motif
Other DBs
NCBI-ProteinID:
WNX83039
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Position
complement(2074216..2076147)
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AA seq
643 aa
AA seq
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MIRIVLIAPFEDLKKEAEQVFAECMENDRAEQNGARAYDLCVLLAPTTAQALSLDLDADV
IIARGATAFDLKRRGFPLPIVELVISGEDTLNVLYNLKEHYGQTPAAMIGSTNMILGIEQ
TAQKIGVNVTPYYLEENTDEEIYRVVMRAVADGKKVILGGMRGCTYAHNLGVEHILLTSG
RSSIWNAITAAKQLGVVSRETKEQSLLRSAMVDNAFEGLIALDQNGNILSMNHSAHNILD
LAPGNWFLGMPIREVLRSPQIAKLIKQSGDYIDEIVEYAQTHLSVKKITIYLREEVIGYV
LTVLNANQIQETEGKLRGKIYHKGHTAKYTFDNIIGESAPIRECIRRANAYAQTNSSIVI
FGESGTGKELFSQSIHNASGRRGQPFVAINCAAIPENLLESELFGYAGGAFTGASKEGKP
GLFELAHNGTIFLDEISEMPLALQSRLLRVIQEREIMRIGHDKVIPIDVRIIAASNRNLY
EQVQKGLFREDLFYRLDVLDLMIPPLRERGGDITLLAQAFLDEFCLGQSRKPIRLSPSAE
QLLERQLWQGNIRELRNFCERLCVLGGSAHVVEADMLKDFLSKGSGCLAPMAEPEKPATE
LELERLLDALEAAKGNKTEAAKALGISRVTLWRQLKRLETEQS
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcattgtattgatcgcgccatttgaagatttgaagaaggaagcggagcaggtt
tttgcggaatgcatggaaaacgaccgagccgaacagaacggcgcacgcgcttatgatctt
tgcgtacttcttgcaccgacgacggcgcaggcgctgtcactcgatctggacgcggatgtg
atcatcgcgcgcggcgcgactgcttttgaccttaagcgccgtgggtttccgttgccgatt
gttgaactcgtcatatcgggtgaagatacgttaaatgtgctctataatttaaaggagcat
tacgggcagacgcccgccgccatgatcggctcgacaaatatgattttggggatcgagcag
accgctcaaaaaatcggcgtcaatgtcacaccttactacctagaagaaaatacggacgaa
gaaatataccgtgtcgtcatgcgtgccgttgcagatgggaaaaaggtgatattgggcggc
atgcggggctgtacttacgcgcacaaccttggcgtagaacatattttgctgacttccggc
agaagctcgatatggaacgccattaccgcggccaaacagcttggcgtagtcagccgtgaa
acaaaggagcagagcctgttgcgctcggcaatggtggacaatgcatttgagggactaatc
gcgctcgatcaaaacggcaatattttatcgatgaaccattctgcgcacaatatattggat
cttgcgcccgggaattggttcttgggcatgcccatacgggaggtgctgcgatctccgcaa
atcgcaaagctgatcaaacaatcgggcgactatattgacgagattgttgagtatgcgcaa
acccatctgtccgttaagaaaattacgatatatttgcgggaagaagtgattggctatgtg
ctgaccgttttgaatgcaaaccagattcaggagacggaggggaagctgcgcggcaagatt
tatcacaaagggcatacggcaaaatacacgtttgacaatatcattggagagagcgcgccg
atccgcgaatgcatccggcgtgcaaacgcttatgcacaaaccaattccagcattgttatc
tttggagagagcggcacgggcaaagaactgttcagccaatcaattcacaatgccagcggg
cggcggggccagccgtttgtcgctatcaactgcgcggcaattccggagaatttgctggaa
agcgagctgtttggttatgccggcggtgcgttcaccggcgccagtaaggaggggaaaccc
ggtctgtttgaactggcgcataacggaacgatttttttagatgaaatatcagaaatgcct
ctggcgttacaaagccgcttgcttcgcgtgattcaggaaagggagatcatgcgcatcggc
catgataaagtgatcccgatcgatgtacgcatcattgccgctagcaaccgaaatctatac
gagcaggtgcaaaagggattgtttcgggaagatctgttttaccgtctggatgtgctcgac
ttgatgataccgcccctgcgggagcgcggcggcgatatcacactgctggcgcaggcgttt
ctggatgaattctgtttagggcagagtaggaagccgatccggctttctccttcagccgag
cagctattggagcggcagctctggcaaggcaatatccgtgagctgcgcaatttttgtgag
cggttatgcgtgctgggcggctcagcgcatgtggtggaagccgatatgctaaaggacttt
ttatctaaaggaagcggctgccttgcgccgatggctgagccggagaaaccggcaaccgaa
ttggaactggaaaggctgcttgacgcgctggaggcagcgaaaggcaataaaacagaggcg
gccaaagcgctgggcataagccgcgtcacgctttggcgtcagctcaaacggctggagacg
gaacaaagctga
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