Agathobaculum sp. NTUH-O15-33: RWV98_10790
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Entry
RWV98_10790 CDS
T09495
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
agat
Agathobaculum sp. NTUH-O15-33
Brite
KEGG Orthology (KO) [BR:
agat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
agat03009
]
RWV98_10790
Enzymes [BR:
agat01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
RWV98_10790
Ribosome biogenesis [BR:
agat03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RWV98_10790
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
WNX83109
LinkDB
All DBs
Position
2158141..2159112
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AA seq
323 aa
AA seq
DB search
MKEYSIAKNDSGQRLNKFLEKAVPRLGGGQMHKYLRLKRIKVNGKRAEASLRLSEGDLVQ
LYLNDAYFSPVREDEAFRLISSPKLTVIYEDANILLADKAPGMVVHADESGDADTLIAHI
QAYLVQTGAWDPADAASFSPALCNRIDRNTGGIVVAAKTAEALRILNEKIKAHELIKKYL
LIVHGAPTPPSGQIENFLRRDEKRKQVTLHSARVPGSKTAITRYRTLAKNGGLSLVECEL
LTGRTHQIRAHMASIGCPLLGDGKYGSNEQNRPYHEKGQALYAYSLTFRFGDGAGALSYL
NGKTFRVKDIPFVRKYFPGFQLS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagtacagtatcgcgaaaaacgacagcggccagcgcctgaacaaatttcttgaa
aaagcggtgccgcggcttggcggcggccagatgcataaatacctgcgcctcaagcgcatc
aaggtgaacggcaagcgggccgaggcttcgctccgcttgtccgagggcgaccttgtacag
ctctatctcaacgatgcgtatttctcccccgtgcgggaggacgaggcgttccggctgatc
tcgtcccccaaactcacggtgatttatgaggatgcaaacattttacttgccgacaaggca
cccggcatggtcgtccacgccgacgagtccggcgacgccgatacgctgatcgcgcacatt
caggcctatctggtgcagacaggcgcgtgggacccggcggacgccgcgtccttctcgccc
gccctatgcaaccgaatcgaccgcaataccggcggcattgtcgtcgccgcaaaaaccgcc
gaagcgctgcgtatattaaatgaaaagatcaaggcacacgaattgatcaaaaaatatctg
ctgatcgtgcacggcgcgccgacgccgcccagcggtcagatcgagaactttctgcgccgc
gatgaaaagcgcaagcaggtcacgttgcatagcgcccgggtgccgggcagcaaaacggcg
atcacccgctaccgcacgctggcaaaaaacggcgggctttcccttgtcgaatgcgaactg
ctgaccggccgcacgcaccagatacgcgcccacatggcctccatcggctgtccgctgctg
ggcgacggtaaatacgggtcaaacgaacaaaaccggccgtaccatgaaaagggacaggcg
ctttacgcctactccctcacctttcgcttcggggacggcgcgggcgcgctctcctattta
aacggcaaaaccttccgggtcaaggacattccctttgtgcgaaaatatttccccggcttc
cagctttcttag
DBGET
integrated database retrieval system
