Agathobaculum sp. NTUH-O15-33: RWV98_10965
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Entry
RWV98_10965 CDS
T09495
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
agat
Agathobaculum sp. NTUH-O15-33
Pathway
agat03030
DNA replication
agat03410
Base excision repair
agat03420
Nucleotide excision repair
agat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RWV98_10965 (polA)
03410 Base excision repair
RWV98_10965 (polA)
03420 Nucleotide excision repair
RWV98_10965 (polA)
03440 Homologous recombination
RWV98_10965 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agat03032
]
RWV98_10965 (polA)
03400 DNA repair and recombination proteins [BR:
agat03400
]
RWV98_10965 (polA)
Enzymes [BR:
agat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RWV98_10965 (polA)
DNA replication proteins [BR:
agat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RWV98_10965 (polA)
DNA repair and recombination proteins [BR:
agat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RWV98_10965 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RWV98_10965 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
DNA_pol_A_exo1
NAD_binding_11
Motif
Other DBs
NCBI-ProteinID:
WNX83133
LinkDB
All DBs
Position
complement(2209269..2211899)
Genome browser
AA seq
876 aa
AA seq
DB search
MKIMVIDGNSILNRAFYGIRQLSNHEGLPTNGIYGFLSTLFKLQEDEKPDRTVVCFDVRE
KTFRHKKFESYKATRKGMPDELAAQLPVLKEVLDAMGLTRAEQPGFEADDLIGTISRLAD
ENGDDCVIVTGDKDSLQLVGGGTVVSLVSTRMGQTTYERYDTAKFHEKYGFDPIRLIDLK
ALMGDSSDNISGVPGVGEKTAMQLMHDFGSLEEIYAHLDDPGIKKSVKTKLEAGEQAAKD
SYWLATIDRQAPLSLDVKNLPEEFMDEEALYGLLTRLEFKNFIARLGLSGETAKFGLPEV
AAEELTRASEAFALCDALGAEEDPVFAVIAGSLSSFCLLAGDTAHVLFEQQFEPEDWDAL
TDRLFDGSISLVLHDAKPVCHALMRMGKEPKGIAFDTCLAAYLLDPTQGSYDLPRVALAY
CNTELPEIDWEAGPSLLGDTEEALRSMAAHANAVRAIYQEAEAKLEEWGMHALYFDIELP
LMHVLAEMEALGCAVAPDQLRTFGQTLDKRISELVDEIYKDAGGEFNINSPRQLGEILFE
RLGLPAQKKTKTGYSTNVEVLEGLAEQHPIVGRILEYRQLSKLKSTYVDGLLKVISPEDG
RIHSHFQQTVTATGRLSSTDPNLQNIPVRTELGRELRRMFVAGDREHVLIDADYSQIELR
VLAHISQDEVMTEAFLHGQDIHTATASKVYHVPIEDVTPQMRSSCKAVNFGIVYGISDFS
LAQDIGVSRKQAGEFIRSYLATYPGVAKYMEEIKESAREKGYVETLFGRRRALPELKSKN
FNIRSFGERVAMNTPIQGTAADIIKIAMVRVHDRLLREGLKSRLILQVHDELILEAPVEE
RDTAMRLLREEMEGAFQMTAPLVAEAKAGFSWYDAK
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgaagataatggtgatcgacggcaacagcatactcaaccgcgctttttacggcattcgc
cagctttccaaccacgaaggcttgccgacaaatggcatttacggttttttatccacgctg
tttaaactgcaggaggatgaaaagcccgaccgtacggtagtctgttttgacgtgcgcgaa
aaaaccttccgccataaaaaatttgaatcctataaggcgacgcgcaagggcatgccggac
gagcttgccgctcagctgccggtgctcaaagaagtgctggacgccatgggtctgacgcgc
gccgagcagcccggctttgaggcggacgacctgatcggtacgatcagccgcctggcggat
gaaaacggcgacgactgcgtgatcgtgaccggcgataaggacagcttgcaactggtcggc
ggcggcacggtcgtcagtctggtatccacccgcatggggcagacgacttacgaacgctat
gatacggctaaattccatgaaaaatacggttttgatcccatccgcctgatcgatttgaag
gcgctgatgggcgattcgtctgataacatttccggcgtgccgggcgtgggtgaaaaaacg
gcgatgcagctaatgcacgattttggctcattggaggagatctatgcgcatctggatgat
ccggggatcaaaaagagcgtgaagaccaagctcgaggcgggcgagcaggccgcgaaggac
agctattggctggcgaccatcgaccgtcaggcgccgctttcccttgatgttaagaacctg
cccgaggaattcatggatgaagaggcgctgtatggactgctgacgcggctggaatttaaa
aactttatcgctcggctggggctttcgggcgaaaccgcaaaattcggactgcccgaggtc
gccgcggaagagctgacccgcgcgagcgaggcctttgcgctatgcgacgcgcttggcgcg
gaagaggaccctgtgttcgcggtgatcgcgggaagcctcagttcgttctgcctgctcgcg
ggggataccgcgcacgtgctgttcgagcagcaatttgagcctgaggactgggacgcgttg
acggaccggctgttcgacggctcgatctcgctggtgctgcacgatgcgaagccggtatgc
catgcgctgatgcgcatgggcaaggaacccaagggcattgcattcgacacctgccttgcc
gcctatctgctcgatccgacgcagggaagctacgacctgccgcgcgtggcgctggcttac
tgcaataccgagctgcccgagatcgactgggaagcgggcccctcgctgctcggcgatacc
gaagaggcgcttcgctcaatggcggcgcacgcgaacgccgtgcgcgcgatctatcaggag
gccgaagccaagctggaagagtggggcatgcatgcgctttacttcgatatcgagctgccg
ctgatgcatgtgctggcggagatggaggcgctcggctgcgcggtcgcgcccgatcagctg
cgaacgtttggacaaacgctcgataagcgcatctcggagctggtcgacgagatctacaag
gatgcgggcggcgaatttaacatcaattccccgcgccagttgggcgaaattctgtttgag
cgtctgggcttgcccgcgcagaaaaagaccaagacaggctattccacgaacgtggaggta
ctggaagggctggcggaacagcatccgatcgtgggccgcattttggagtaccggcagctt
tccaagctcaagagcacctatgtggacggactgctcaaggtaatcagcccggaggatggc
cgtattcattcgcattttcagcagacggtaacggcgaccggccgcctttcttcgaccgac
cccaatttgcagaatatccccgtgcgcaccgagctgggacgggaattgcggcgcatgttc
gtcgcgggcgaccgggagcatgtgctgattgacgcggattactcgcagatcgagctgcga
gttttggcgcatatctcgcaggacgaagtcatgaccgaggcgtttttgcatggacaggat
attcacaccgcgaccgcgagcaaggtgtaccatgtgccgatcgaggatgtgaccccccag
atgcgttcctcctgtaaggcggttaatttcggcattgtttacggtatttctgatttttcg
ctggcgcaggatatcggcgtttcccgcaagcaggcgggcgaatttatccgctcgtatctt
gccacatatccgggcgttgcaaaatatatggaggagatcaaggagagcgcacgcgagaag
ggctatgtcgagaccctgtttggccgccgccgcgcgctgcccgaactgaaaagcaaaaac
ttcaatatccgctcgttcggcgagcgtgtggcgatgaacacgcccatacagggcacggcg
gcggacatcatcaagatcgccatggtgcgcgtacacgaccggctgctgcgcgaggggctg
aaaagccgcttgattttgcaggtgcacgatgagctgatccttgaagcgccggtggaggag
cgggacaccgcgatgcgtctgctgcgcgaggagatggaaggcgcgtttcaaatgacggcg
ccgcttgtggccgaagccaaggcggggtttagctggtacgacgcaaaatag
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