Agathobaculum sp. NTUH-O15-33: RWV98_11105
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Entry
RWV98_11105 CDS
T09495
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
agat
Agathobaculum sp. NTUH-O15-33
Brite
KEGG Orthology (KO) [BR:
agat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agat03032
]
RWV98_11105
03036 Chromosome and associated proteins [BR:
agat03036
]
RWV98_11105
03400 DNA repair and recombination proteins [BR:
agat03400
]
RWV98_11105
DNA replication proteins [BR:
agat03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RWV98_11105
Chromosome and associated proteins [BR:
agat03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RWV98_11105
DNA repair and recombination proteins [BR:
agat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RWV98_11105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_2
HU-HIG
DUF2267
HU-CCDC81_euk_1
HU-CCDC81_bac_2
YmgD
Motif
Other DBs
NCBI-ProteinID:
WNX83158
LinkDB
All DBs
Position
complement(2231685..2231963)
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AA seq
92 aa
AA seq
DB search
MKKSDFVTMVAEQAELSKKDTEKVIDVVFAALGDVLAQNDKLQISGFGTFETKERAARTG
HNPRTGEAIEIAAATMPVFKPGKALKDKLNEQ
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagcgatttcgtgacgatggtagcggagcaggccgagctttctaagaaggat
actgaaaaggtgatagacgttgtgtttgccgcgctgggcgacgtactggcgcagaacgac
aagctgcagatcagcggcttcggcacatttgaaaccaaggagcgcgccgcgcgcacgggc
cataatccccgcaccggcgaagccattgagattgccgctgctaccatgcccgtattcaag
cccggcaaggctctgaaggacaagctgaacgaacagtga
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