KEGG   Agathobaculum sp. NTUH-O15-33: RWV98_11105
Entry
RWV98_11105       CDS       T09495                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
agat  Agathobaculum sp. NTUH-O15-33
Brite
KEGG Orthology (KO) [BR:agat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:agat03032]
    RWV98_11105
   03036 Chromosome and associated proteins [BR:agat03036]
    RWV98_11105
   03400 DNA repair and recombination proteins [BR:agat03400]
    RWV98_11105
DNA replication proteins [BR:agat03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    RWV98_11105
Chromosome and associated proteins [BR:agat03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    RWV98_11105
DNA repair and recombination proteins [BR:agat03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      RWV98_11105
SSDB
Motif
Pfam: Bac_DNA_binding HU-CCDC81_euk_2 HU-HIG DUF2267 HU-CCDC81_euk_1 HU-CCDC81_bac_2 YmgD
Other DBs
NCBI-ProteinID: WNX83158
LinkDB
Position
complement(2231685..2231963)
AA seq 92 aa
MKKSDFVTMVAEQAELSKKDTEKVIDVVFAALGDVLAQNDKLQISGFGTFETKERAARTG
HNPRTGEAIEIAAATMPVFKPGKALKDKLNEQ
NT seq 279 nt   +upstreamnt  +downstreamnt
atgaaaaaaagcgatttcgtgacgatggtagcggagcaggccgagctttctaagaaggat
actgaaaaggtgatagacgttgtgtttgccgcgctgggcgacgtactggcgcagaacgac
aagctgcagatcagcggcttcggcacatttgaaaccaaggagcgcgccgcgcgcacgggc
cataatccccgcaccggcgaagccattgagattgccgctgctaccatgcccgtattcaag
cccggcaaggctctgaaggacaagctgaacgaacagtga

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