Agathobaculum sp. NTUH-O15-33: RWV98_11540
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Entry
RWV98_11540 CDS
T09495
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
agat
Agathobaculum sp. NTUH-O15-33
Brite
KEGG Orthology (KO) [BR:
agat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agat03019
]
RWV98_11540 (rnc)
03009 Ribosome biogenesis [BR:
agat03009
]
RWV98_11540 (rnc)
03036 Chromosome and associated proteins [BR:
agat03036
]
RWV98_11540 (rnc)
Enzymes [BR:
agat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
RWV98_11540 (rnc)
Messenger RNA biogenesis [BR:
agat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RWV98_11540 (rnc)
Ribosome biogenesis [BR:
agat03009
]
Eukaryotic type
90S particles
RNase
RWV98_11540 (rnc)
Prokaryotic type
rRNA processing factors
RWV98_11540 (rnc)
Chromosome and associated proteins [BR:
agat03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
RWV98_11540 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
NTP_transf_4
Motif
Other DBs
NCBI-ProteinID:
WNX83242
LinkDB
All DBs
Position
complement(2329687..2330358)
Genome browser
AA seq
223 aa
AA seq
DB search
MLNLNYKFKNAVLLNTALTHSSYANEHKSQHLHHNERLEFLGDSVLGFVTADHLMNRFPD
LPEGELTKIRASVVCESALCGIAAEIGLRDHIRLGHGEEAGGGRDRASILADATEALIGA
IYLDGGIEPARAFVLRFIPKKVDASLAGCMFKDYKTMLQEIVQKNKQETLSYRLAGQSGP
DHDKRFQMELLLNSNVFATGEGRSKKEAEQMAAKKALELMGEE
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatctaaactataaatttaaaaacgcggtacttttgaacacggcgctgacgcat
tcgtcctatgccaacgagcacaagagccagcacttgcatcacaatgagcggctggaattt
ttgggcgactctgtgctgggctttgtcacggcggatcatctgatgaaccgcttccccgat
ctgccggaaggggagttgaccaagatccgcgcctctgtcgtgtgcgaaagcgcgctgtgc
ggcatcgcggcggagatcggcctgcgcgaccatatccgtctgggtcacggcgaggaggcg
ggcggcggccgcgaccgtgcctctattttagcggacgcgaccgaggcgctgatcggcgcg
atctatctggacggcggcatagagcccgcgcgggcgttcgttctgcgttttattcctaaa
aaggtggacgcttcgcttgctggctgcatgtttaaggactataagaccatgctgcaagaa
attgtgcagaaaaacaagcaggaaacactgtcctaccgtttggccgggcaatccggtccg
gaccacgacaagcgctttcaaatggagctgctgcttaactccaacgtctttgccaccggc
gaaggccgcagcaagaaagaggcggagcagatggcggccaaaaaagcactggaactcatg
ggcgaggaataa
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