Agathobaculum sp. NTUH-O15-33: RWV98_11625
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Entry
RWV98_11625 CDS
T09495
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
agat
Agathobaculum sp. NTUH-O15-33
Brite
KEGG Orthology (KO) [BR:
agat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
agat03009
]
RWV98_11625
Enzymes [BR:
agat01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
RWV98_11625
Ribosome biogenesis [BR:
agat03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RWV98_11625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF5818
Motif
Other DBs
NCBI-ProteinID:
WNX83259
LinkDB
All DBs
Position
complement(2348773..2349522)
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AA seq
249 aa
AA seq
DB search
MPGMRLDKILTHLNCGSRREVAAWVRAGRVTVDGQTVRDPAYKADPDLAALTLDGRALCY
RAQRYYMLNKPAGVITANRDGRHQTVMELFPENERKGLFAIGRLDKDTEGLLLITDDGAL
SHALMAPGRHVQKLYEAVCDGELAPDAEARFHEGLTLGDGTVCRPAALEIVRDAPALTVR
VTLCEGKYHQVKRMLKAVGAEVTALKRLSIGALGLDTSLASGAYRPLTEAEIALLRPSEG
LAAATSTKK
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgcccggaatgcgtttggataaaattctcacacatctcaactgcggcagcaggcgcgag
gtcgccgcgtgggtccgcgcgggccgtgtgacagtggacggacaaaccgtacgcgatccc
gcgtataaggccgatcccgatcttgccgcgctcacgctggacggcagggcgctttgttac
cgcgcgcagcggtattatatgctcaataaacccgccggcgtcataaccgccaacagggac
ggccgccatcaaacggtgatggaactgtttcccgagaacgaacgcaagggcctgtttgcg
atcggccggctagataaggacacggaagggctgcttttgatcacggacgacggcgctttg
agccacgcgctcatggccccgggccgccatgtgcaaaagctgtacgaagccgtgtgcgat
ggtgagctcgcgccggacgccgaagcccgttttcacgaggggctgacgctgggggacggc
acggtatgccgccccgccgcgttggagatcgtgcgcgacgcgcccgcgctcaccgtgcgc
gtgaccctgtgcgagggcaagtaccatcaagtgaaacgcatgctcaaagccgtgggggcg
gaggtgaccgcgctcaagcggctgtcgatcggcgcgctggggctggacacgtcgctcgcg
tccggcgcataccgtccgctgacggaggctgaaatcgcgcttttgcgcccttcggagggg
cttgccgcggcgacctcaacaaaaaaataa
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integrated database retrieval system
