Agathobaculum sp. NTUH-O15-33: RWV98_11995
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Entry
RWV98_11995 CDS
T09495
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
agat
Agathobaculum sp. NTUH-O15-33
Brite
KEGG Orthology (KO) [BR:
agat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
agat03000
]
RWV98_11995
Transcription factors [BR:
agat03000
]
Prokaryotic type
Helix-turn-helix
Other families
RWV98_11995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
PAS
Mg_chelatase
GAF
AAA_5
PAS_8
PAS_9
AAA_2
PAS_4
HTH_28
HTH_17
AAA
HTH_50
HTH_30
AAA_7
HTH_7
HTH_23
MCM
HTH_29
DUF815
ATPase
AAA_3
HTH_Tnp_ISL3
HTH_11
Motif
Other DBs
NCBI-ProteinID:
WNX83332
LinkDB
All DBs
Position
2440573..2442591
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AA seq
672 aa
AA seq
DB search
MSNDLSLQREQRARQLFFEQGFCDLNIFPEEIYDSWRRCLAHHLDPAAPMKKVLSKGEFK
MRCDQNAQLLSIAVPFMELLYQVVKDTDFSIMLSDSDGYILKLIGDPSILRDYKHKDNPL
VEGSCRSENIFGTNGIGTSLALRKPIQLTPNQHFRLEPHPVSGTGAPIILANGTPIGALS
MSGPPNKVHRHTLGMITAASRAIEEQFALQQTNTQLATTKNQLQTILDTFDQGVFLIDSN
YTIIDANRTAQKLLGFGKHEIINQSVFSFIKKLDFSNVESAVYDVELSFHTRFKTENFFV
TLHRIDQDAYHSFLIVFRESERVHNLVNKYIGSNAYFTFDDIIGESTAIVSVKENAQIAA
QNGSNVLLVGESGTGKELFAQSIHNSSSFCNGPFIAVNCGAIPRTLIESELFGYESGAFT
GAKRSGNAGKFELANNGTIFLDEIGDMPYEVQIDLLRILQTREVTRIGGTKPIPLNIRII
AATNVDLEQAIAEKTFRRDLYYRLNVLTFHIPPLREREQDALLLADYFIQKYQQPHRQSL
LGISPSVRQLFLQYPWPGNIRELENTIERACLLTQEHEISPKHLPINILKGTIFHNSASS
QRDDKAFRIQIASSGSSIRPVEAAEKELIETTLKICCGNIKETAERLGLSRRTLYRKVDK
YHIDYYGIRKLF
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgatttgtcattgcaaagagagcagcgggcgcggcagctattttttgaacaa
ggcttttgcgatctcaacatttttccggaggaaatctatgactcatggaggcgctgtcta
gcacatcatcttgatcccgcggctcccatgaaaaaggttttatccaaaggtgaatttaaa
atgcgctgcgatcaaaacgcgcagctcttatcgattgccgtaccattcatggaattgctt
tatcaggtcgtcaaggatactgatttttcaattatgctatcggatagcgacggctacatc
ttaaagctcattggcgatccgtctattctgcgggactataagcataaagacaaccccttg
gttgaaggttcctgccgcagcgaaaatatatttggcaccaacggtataggaacgtcgctc
gctctgcgcaagcccattcagttgacgcccaaccagcatttccgtttggagcctcatccg
gtgagcggtacaggcgctcccatcatcttagccaacgggacgccgatcggcgctttatcc
atgtccggtccacccaacaaagtacatcggcatacgcttggtatgatcaccgccgccagc
agagccattgaagagcaatttgctttgcagcaaaccaacacgcagctcgctaccaccaaa
aaccagttgcaaacgatcttggacacctttgatcagggcgtttttctgattgacagcaat
tatacgatcatcgatgcgaaccgtaccgcccaaaagcttttgggatttggcaagcatgag
attatcaatcagtcggtcttttcttttattaaaaagctggatttttcaaatgttgaatcc
gctgtctatgatgtagagctatcgtttcacacacgatttaaaacagaaaatttctttgtc
accctgcataggatcgatcaggatgcctatcattctttcctgatcgtatttagagagtct
gagcgtgtgcataatcttgtcaacaagtacattggttccaatgcctactttaccttcgac
gatatcattggcgaatccaccgcgattgtatcggtcaaagagaacgcacaaatcgctgcg
caaaacggctcgaacgttctgttagttggcgaaagcggcaccggcaaggagctatttgca
caatccattcacaacagcagcagcttttgcaatggcccgttcattgcggttaactgcgga
gcgattccccgcaccttaatcgaaagcgagttgttcggttatgaatccggcgcttttaca
ggcgccaaacggtccggtaacgccggcaagtttgagcttgcgaacaacggcactattttt
cttgacgaaatcggcgatatgccatatgaggtgcagatcgatctgcttcgcatactgcaa
acgagagaagtcacgcggatcggcggaaccaagccaatcccactgaacatccgaatcatc
gccgccaccaacgtcgatctggagcaagccatcgcggaaaaaacgtttcggcgtgatcta
tactaccgcttaaatgtactgacctttcacatccctccacttagagagcgtgaacaggat
gcgctcctattggccgattatttcattcaaaaataccagcagccgcacaggcaatcgtta
cttggcatttctccttccgtacggcagttatttctacagtatccttggcccggcaacatc
cgcgaacttgaaaacacgattgagcgcgcgtgtttactcacccaagagcacgaaatctcg
cccaaacacttgcccattaacattttgaaaggtacaatatttcacaattccgcttcttcg
cagcgtgacgacaaggcttttcgcattcaaatagcatcctccggctcttcgatccgcccc
gttgaggcggccgaaaaagagttgatcgaaaccacactaaaaatttgctgcggtaatatc
aaagaaacggccgagcgattaggtctcagccgccgcacactgtatcgaaaggtcgataaa
tatcacatcgattactatggaatccgcaagctattttaa
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