Agathobaculum sp. NTUH-O15-33: RWV98_12010
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Entry
RWV98_12010 CDS
T09495
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
agat
Agathobaculum sp. NTUH-O15-33
Pathway
agat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RWV98_12010 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agat03019
]
RWV98_12010 (groL)
03110 Chaperones and folding catalysts [BR:
agat03110
]
RWV98_12010 (groL)
03029 Mitochondrial biogenesis [BR:
agat03029
]
RWV98_12010 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
agat04147
]
RWV98_12010 (groL)
Enzymes [BR:
agat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RWV98_12010 (groL)
Messenger RNA biogenesis [BR:
agat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RWV98_12010 (groL)
Chaperones and folding catalysts [BR:
agat03110
]
Heat shock proteins
HSP60 / Chaperonin
RWV98_12010 (groL)
Mitochondrial biogenesis [BR:
agat03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RWV98_12010 (groL)
Exosome [BR:
agat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RWV98_12010 (groL)
Exosomal proteins of other body fluids (saliva and urine)
RWV98_12010 (groL)
Exosomal proteins of breast cancer cells
RWV98_12010 (groL)
Exosomal proteins of colorectal cancer cells
RWV98_12010 (groL)
Exosomal proteins of bladder cancer cells
RWV98_12010 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF4928
Motif
Other DBs
NCBI-ProteinID:
WNX83335
LinkDB
All DBs
Position
complement(2444223..2445839)
Genome browser
AA seq
538 aa
AA seq
DB search
MARDLYYGEDARNKLWNGVDKLASAVKVTLGPKGRNVLVDRPSGTPLIANDGATVTNGIE
LEDITENLGAQMLKEVADKTNSEVGDGTTTTILLTQAIIREGLKNIAAGANPMAVRRGIH
GAVDVVVKALDEQAYRVEKTEDIARAATVSGSDEAVGRMIAQIMEQIGQDGVITVEEGKT
LDTTFEIVTGTQFDKGYLSSYMVSDKERMEAVLDHPYILFTDKKISDLQDVIPLLDQVAQ
LKRTLLIVADDVEGKALTALIVNKMQGAIDVVAVRAPGFGDRKKALVDDLALLTGATVVR
EETGDVLSEATVDILGQAEKVTIMKDRTLIINGAGDQEKIADRMAMLRRQLAEAKTEFDI
DKARERLGKLAGGVGVIKVGAASEVELKEKKLRIEDALNATRAALAEGVVAGGGLALCNT
VAAVEAYAQELMGDEKTGARIICRAIEEPARQIAENAGCSGDVVIAESMRRGEGIGFDAE
TNTYVPMIEAGIVDPVKVTKQALKNAASMASTFLTTEVDVIDPKDEAWLRKHGGNPLM
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcaagagatttatattatggtgaggacgccagaaacaagctttggaacggcgtggat
aagctcgcaagcgcggtgaaggtcacgctggggccaaagggcaggaatgttttggtggac
aggccgtccggcacgccgctcattgcaaacgatggggcgactgtcaccaatggcatcgaa
ttggaggacatcactgaaaacctaggcgcgcagatgctcaaggaggttgccgataaaacc
aatagcgaagtcggagacggcacgacgacgacgatcctgctgacgcaggccatcattcgt
gagggcctgaaaaatatcgctgcgggcgcgaaccccatggcggtcagaagaggcatccac
ggcgcggtcgacgtggtggtcaaagcgctggacgagcaggcgtatcgcgtggaaaagacg
gaagacatcgcacgggctgcgaccgtgtccggttctgacgaagcggttggccgtatgatc
gctcaaatcatggagcagatcggtcaagacggcgttatcacggtcgaagagggaaaaacg
ctggacaccacgtttgagatcgtaaccggtacgcagtttgacaagggctatctttcctct
tatatggtaagcgataaggaacggatggaagcggtgctggatcacccttatatcttgttt
acagataagaagatcagcgacttgcaggatgtcattccgctgctcgatcaggtcgcgcaa
ctcaaacggacgcttttgatcgtggccgatgacgtcgagggcaaggcgctcacggcgttg
atcgtaaataagatgcagggtgcgatcgacgttgttgcggtccgcgcgcccggctttggc
gacagaaagaaggcgctggtggacgatctggcgcttttgaccggcgcaacggtggtccgg
gaggaaacgggcgacgtgctgagcgaggcgaccgtcgatatcctcggtcaggctgaaaag
gttacgatcatgaaggatcggacgctcatcatcaatggcgccggcgatcaggagaagatc
gcggatcgaatggcgatgctgcgcaggcagctcgcggaagcaaagaccgaatttgatatt
gataaggcgcgggaacggctgggtaagctcgccggcggcgtgggcgtcatcaaagtcggc
gctgcgtccgaggtagaactgaaagagaagaagctgcggatcgaggatgctttgaatgcg
acgcgcgccgctttggcggaaggcgtagtcgccggaggcggccttgctctctgcaatacg
gttgccgccgtggaagcgtatgcacaggagttgatgggcgatgagaaaactggcgcgcgc
atcatttgccgggcgatcgaggagccggccagacagatcgcggaaaacgcgggttgcagc
ggcgatgtggtcatagccgagtcgatgcggcgcggcgagggcatcggttttgacgccgaa
accaatacttatgtaccgatgatcgaagcaggcatcgtggatcctgtgaaggtgaccaag
caggcgctgaaaaacgctgcctcaatggcctccacgtttttgaccacggaagtggacgtg
attgatcctaaggacgaagcatggctgcgaaagcatggcggtaatccgctgatgtga
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