Agathobaculum sp. NTUH-O15-33: RWV98_14445
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Entry
RWV98_14445 CDS
T09495
Symbol
abc-f
Name
(GenBank) ABC-F type ribosomal protection protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
agat
Agathobaculum sp. NTUH-O15-33
Pathway
agat02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
agat00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RWV98_14445 (abc-f)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
agat02000
]
RWV98_14445 (abc-f)
01504 Antimicrobial resistance genes [BR:
agat01504
]
RWV98_14445 (abc-f)
Transporters [BR:
agat02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
RWV98_14445 (abc-f)
Antimicrobial resistance genes [BR:
agat01504
]
Gene variants
Macrolide resistance genes
Transporters
RWV98_14445 (abc-f)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_22
Pox_A32
ABC_tran_Xtn
TXNDC16_3rd
Motif
Other DBs
NCBI-ProteinID:
WNX83780
LinkDB
All DBs
Position
2990753..2992228
Genome browser
AA seq
491 aa
AA seq
DB search
MSMIQISDLTFGYEGSAETIFDHISLRLDTDWRLGLIGRNGRGKTTFLNLLRGQFEYQGR
ITASVSFEYFPFPIARPERPAREAVLPLCPEEESWRLALEMNRLALSEELLGRPFSTLSG
GEQVRLLLAALFCREDRFLLIDEPTNHLDQAGRALVAEYLRGKSGFLLVSHDRTFLDGCI
DHVLSINRANIELTQGDFSTWWENKRRRDEWEQAENERLKGDIRRLDAAARRASQWSDKT
EKEKHVRNSGLRPDRGYIGHKAAKMMQRSKSIEARKHAAAEEKAGLLHNIESADALKLSP
LSYRAERLAELRQVAVRFGEKTVCSDITFSVTRGARIALMGANGSGKSCLLKLLCGEDIP
HAGVCSRGSGLTISYVPQDASFLSGGLTEYAARCGVDRTLFLAILRKLDFSRAQFETDMA
LYSEGQKKKVLLARSLCERAHLYIWDEPLNYIDLFSRIQLEELIAAYRPTLLFVEHDRSF
CDHIATETVRL
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgattcaaatatccgacctgacctttggctatgaaggcagcgcggaaaccatt
ttcgaccatatttcactccgtctcgacacggactggcgactcggcctgatcggccgcaac
ggccgcggcaaaaccacgtttttgaaccttttgcgcggccaatttgaatatcagggacgc
attaccgcgtctgtttcgtttgagtacttcccgtttcccatcgcgagacccgaacggccc
gcgcgcgaagccgtgctgcccctgtgcccggaggaagaaagctggcggcttgccctcgag
atgaaccggctggcgctgtccgaagaactgctgggccgccccttttccacgctttccggc
ggggaacaggtgcggctgctgcttgccgccctgttctgccgggaagaccgttttctgctc
attgacgaaccgaccaaccacctcgatcaggcgggccgcgcgctggtggcggagtattta
cgcggtaaatccggctttctgctggtctcgcacgaccgcacttttctggacggctgcatc
gaccatgtgctgtccatcaaccgggcgaacattgaactgacgcagggcgacttttccacg
tggtgggaaaacaagcggcggcgggatgaatgggaacaagcggaaaacgaacggctgaag
ggcgatatccgccgccttgacgcggccgcgcgacgcgcttcgcagtggtcggataagact
gaaaaggaaaagcatgtgcggaattccggcctgcggcccgatcgcggctatatcggccac
aaggcggccaaaatgatgcagcgctccaaatccatagaagcgcgcaagcacgccgcggcg
gaggaaaaggcgggactgctgcacaacattgaaagcgccgacgccttgaagctttctccc
ctttcctaccgcgccgaacggctggccgagctgcggcaggtagccgtccgctttggggaa
aaaaccgtttgcagcgatatcacgttttcggttacgcgcggcgcgcgcatagcccttatg
ggggccaacggttcgggcaaatcctgccttttaaagctgctttgcggcgaggatatcccg
cacgccggcgtttgcagccgaggcagcggtcttacgatctcctacgtgccgcaggacgct
tccttcctctccggcggcctgaccgaatacgccgcgcgctgcggcgtcgaccggacgctg
tttctcgcgatcctgcgcaagctggatttttcccgcgcgcagtttgaaacggatatggcg
ctttacagcgaggggcagaaaaagaaggtgctgctcgcacgcagcctgtgcgagcgcgcc
cacctttatatctgggatgagcccttaaactatatcgaccttttctcccgcattcagttg
gaagagctgatcgccgcataccggcccacgctgctgtttgtcgagcatgaccgcagcttc
tgcgaccacatcgcgaccgagaccgtccgtttgtga
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