Agathobaculum sp. NTUH-O15-33: RWV98_15415
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Entry
RWV98_15415 CDS
T09495
Name
(GenBank) 3'-5' exonuclease
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
agat
Agathobaculum sp. NTUH-O15-33
Pathway
agat03420
Nucleotide excision repair
agat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
agat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RWV98_15415
03430 Mismatch repair
RWV98_15415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agat03400
]
RWV98_15415
Enzymes [BR:
agat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RWV98_15415
DNA repair and recombination proteins [BR:
agat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RWV98_15415
MMR (mismatch excision repair)
Other MMR factors
RWV98_15415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
WNX83955
LinkDB
All DBs
Position
complement(3186052..3188454)
Genome browser
AA seq
800 aa
AA seq
DB search
MEPTKFDMKYASIRRAVIEARFEHLNEKQREAVYATEGPLLILAGAGSGKTTVLIQRIIN
MLRFGRGYDAQQAQPGATEQDLLFLTEYLTDPKPENRARAEALCAIDPAKPWEIIAITFT
NKAARELKERLTGAVGEEDASAIWAYTFHTACLRILRRNVDLLGFEQPFTIYDEDEKKRV
IIAALRRLNMDEKIYDPRAVMGMISRAKDRLMTPRQFMTDAHGDHYREKVADVYKLYEKE
MKKACALDFDDIIMKTVLMLQNYPDVLEYYQRKFRYVLVDEYQDTNYAQYVLTSLLAGGY
QNICVVGDDDQSIYKFRGATITNILEFEKQYQNARTIRLEQNYRSTGNILSAANELIRNN
AQRKGKELWTDQTGGAKLRVHRSDSQEGEAGYIADTILAGVEGGRRFSDYAILYRNNVLS
DNIAAAFIRNGIPYRVYKGRDFFSRAEIRDMFAYLWVVENPADTLRLKRIINVPARKIGD
RSVELAEQAAEENGLPLFEVVKNASAYPTLSRAASAMERFGKMIEDLRQQREFLGLSEWY
AEVLNRTGYAEALENKDDMESKSRLEHIEELKSYLLTYEEKNEDPTLAGFLEEMALYTDA
DKTGDEEDAVTMMTMHSAKGLEFPVVFLAGLEDGLFPGFRAMEKDEDMEEERRLCYVAVT
RAREELYMTCAERRLLYGRTQYAHPSRFLQEIPEELTDSNVNQRAFDPPVQPAAQTAREG
IVHARSASVAPAPAARPGRAAAQPAPDFAVGGRVRHRAFGDGLIVSAKPMGGDCLLEIAF
DQKGTKRLMAKSAAQFMEKL
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgacgaaattcgatatgaagtacgcctccatccgccgcgcggtgatcgaggcc
cgctttgaacatttaaacgaaaagcagcgcgaggcggtatacgcgaccgaggggccgctg
ctcatcctcgcgggcgcgggcagcggtaaaaccaccgtgctgatccagcgcatcatcaac
atgctgcgctttgggcgcggatacgacgcccagcaggcgcagcccggcgcgaccgagcaa
gacctgctgtttttgaccgaatacctgaccgaccccaagccggaaaaccgcgcgcgcgcc
gaagcgctgtgcgcgatagaccccgcgaagccgtgggagatcatcgcgattacctttacg
aacaaggccgcgcgcgagctcaaggaacggctgaccggcgcggtgggcgaggaggacgct
tccgccatttgggcgtatacgttccacaccgcctgcctgcgcattctgcgccgcaacgtc
gatctgctgggctttgaacagccgttcacgatctacgacgaggatgagaaaaagcgcgtg
attatcgcggcgctgcgccgcctgaacatggacgagaaaatatacgacccgcgcgcggtg
atgggcatgatttcccgcgccaaggaccgcttgatgacgccgaggcagttcatgaccgac
gcgcacggcgaccactaccgcgaaaaagtggccgatgtgtacaagctttacgaaaaagaa
atgaaaaaggcctgcgcgctggattttgacgatattatcatgaaaaccgtgctgatgctg
caaaactatccggacgtgctcgaatactaccagcgcaagttccgctatgtgctggtggac
gaatatcaggataccaactacgcgcagtacgtgctgaccagcctgctcgcgggcgggtac
cagaatatttgcgtcgtcggcgacgacgaccagtccatctacaaattccggggcgcgacc
attacaaatattctggaatttgaaaagcagtaccagaacgcgcgcaccatccggctggaa
caaaactaccgctcaaccggcaacattctttccgcggcgaacgagctgatccgcaacaac
gcccagcgcaagggcaaggagctttggaccgaccagaccggcggcgccaagctgcgtgtg
caccgctcggacagccaagagggcgaggccggctatatcgcggacaccatcctagcgggc
gtggaaggcgggcggcggttcagcgattacgcgatcctgtaccgcaacaacgttctttcg
gataatattgccgccgcgttcattcgtaatggcatcccctaccgggtatataaggggcgc
gacttcttctcacgcgcggaaattcgggatatgttcgcctatctgtgggttgtggagaac
ccggcggacacgctgcgcctgaagcgcatcatcaacgtgcccgcccgcaaaatcggcgac
cgctcggtcgagctggccgagcaggcggcggaggaaaacggcctgccgctgtttgaagtg
gtgaaaaacgcttccgcgtaccctacgctttcgcgcgccgcttccgcgatggagcgcttt
ggcaaaatgatagaggatctgcgccagcagcgcgagtttttggggctttccgagtggtac
gccgaagtgctcaaccgcacgggctacgccgaggcgctggaaaacaaggacgatatggaa
tccaaaagccgtttggagcatatcgaggagctgaagagctatctgcttacttatgaagaa
aagaacgaagatccgacgcttgccggctttttggaggaaatggccctttacaccgacgcg
gacaagaccggcgacgaagaggacgcggtcacgatgatgaccatgcactcggccaagggg
ctggagttcccggtggtgttcctcgcgggtctggaggacgggctgttccccggcttccgc
gccatggaaaaagacgaggacatggaggaggagcgccgcctgtgctatgtggcggtgacg
cgcgcgcgggaagagctgtacatgacctgcgccgagcgccgcttgctgtacggccgcacg
cagtacgcgcacccctcgcgctttttacaggagattcccgaggagctgacggacagcaac
gtgaaccagcgcgcctttgacccgccggtgcagcccgccgcgcagaccgcgcgcgaaggc
atcgtgcacgcgcgcagcgcgtcggtcgcgcccgctcccgccgcaaggccggggcgcgcc
gcggcccagcccgcgccggattttgccgtcggcgggcgggtacggcaccgcgcctttggc
gacggcctgatcgtttccgccaagccgatgggcggcgattgcttattggagatcgcgttt
gaccagaagggcaccaagcgcctgatggcgaagagcgcggcgcagttcatggagaagcta
taa
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