Agathobaculum sp. NTUH-O15-33: RWV98_18260
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Entry
RWV98_18260 CDS
T09495
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
agat
Agathobaculum sp. NTUH-O15-33
Pathway
agat02010
ABC transporters
agat02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
agat00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RWV98_18260
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RWV98_18260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
agat02000
]
RWV98_18260
Transporters [BR:
agat02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
RWV98_18260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
DUF3502
Motif
Other DBs
NCBI-ProteinID:
WNX84493
LinkDB
All DBs
Position
complement(3763459..3764484)
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AA seq
341 aa
AA seq
DB search
MKNHLKRIFAGFLAAGMALTLTACGDKPAAKQDEPSQTGQPADAAGDAGADGRTFAVVFP
IVHPFFEPIGVDAEEYGAEKGWKVITKAPDSSNAQQQIEIVENLISMGVDGIAVGPTDPD
ALASTIDKALEAGIKVICFETDSPNSKRLAYIGTDNYNAGRHMGAVIEKNLGGKGNIMIL
TGLPTQMSLNERIRGIKEYLGEKCPDIQIIDTQTSEGDAQKAVTATENMIQAHSDFDAII
GIDATAGPAAVSVWKAMGWQNDPEHLIITFDDMPDNLQGMKDGYIKAIVAQRQTSWGVSV
LDLLNDLCDGKTVQDYTDTGSIEITLDNIDTYPDEPSFVES
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatcatttaaaacggatctttgccggatttttggcggcgggaatggcgctgact
ctgaccgcgtgcggcgataagcccgccgcaaagcaggacgagccgagccagaccggccaa
ccggcggacgcggcgggcgatgccggggcggatggccgcaccttcgcggtggtgttcccg
atcgtccacccgttctttgaacccatcggcgtggacgctgaagagtacggcgcggaaaaa
ggctggaaggtcatcaccaaggcgcccgattcctcgaacgcgcagcagcagatcgagatc
gtggaaaacctgatctcgatgggggtggacggcatcgccgtcggcccgaccgacccggac
gcgctggcttctaccattgacaaagcgctcgaggcgggcatcaaggtcatttgctttgag
accgattcgccgaacagcaagcgtctggcctacatcggcacggacaactacaacgcgggc
cgccacatgggcgccgtgatcgaaaagaacctcggcggcaagggcaacatcatgattctg
accggtctgcccacgcagatgagcctgaacgagcgcattcgcggcatcaaggaatacctt
ggcgaaaagtgcccggatattcagatcatcgatacgcagaccagcgagggcgacgcgcag
aaggccgtcaccgcgacggaaaacatgattcaggcgcacagcgactttgacgccatcatc
ggcatcgacgcgacggcgggcccggcggcggtatcggtctggaaggccatgggctggcag
aacgaccccgaacacctgatcatcacgtttgacgacatgcccgacaacctgcagggcatg
aaggatggttatatcaaggccatcgtcgcccagcggcagacctcgtggggcgtcagcgtg
ctcgatctgctgaacgatctgtgcgacggcaagacggtgcaggattacacggacaccggc
tcgatcgagatcacccttgacaatatcgatacctatccggacgagccttccttcgtcgaa
tcataa
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