Anoplophora glabripennis (Asian longhorned beetle): 108904156
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Entry
108904156 CDS
T07402
Name
(RefSeq) putative U5 small nuclear ribonucleoprotein 200 kDa helicase
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
agb
Anoplophora glabripennis (Asian longhorned beetle)
Pathway
agb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108904156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
agb03041
]
108904156
Enzymes [BR:
agb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108904156
Spliceosome [BR:
agb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
108904156
Complex C
U5 SnRNP specific factors
108904156
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
WHD_SNRNP200
DEAD
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_22
AAA_30
HTH_61
Peptidase_C39
Motif
Other DBs
NCBI-GeneID:
108904156
NCBI-ProteinID:
XP_018562101
LinkDB
All DBs
Position
Unknown
AA seq
2137 aa
AA seq
DB search
MADAAARQLQYEYKANSNLVLQADVRFIERRSRDEATGEVMSLVGKLTGTKMGDRAQRTR
PGKAEERKAKRQKRDEAQYDFARMKGVTLLSEGVDEMVGIIYRPKTQETRQTYEVLLSFL
QEALGDQPRDILCGAADEVLQVLKNDRLKEREKKKETETLLGPIAEERFALLVNLGKKIT
DFGNEENKANTGEENIDETYGINVQFGGGSEEEDDEDMYGEVREEMDDEEGEEAKEDSAI
HAENLGGVEEMKKEKALHPLDIDAYWLQRRLSKIYDDAMVSQAKATEVLNVLRDAGDDRE
CENQLVLLLGYDCFDFIKQLKKHRQMILYCTLLAKSQSDSERQKIKDKMSDDPSLHRILK
LLETGKGDDDDEDDESASRSHRRKNDSDDMDTGSAQVAGSRHLIDFEDLVFQQGSHFMAN
KRCQLPDGSFRKQRKGYEEVHVPALKPKPFGDNEKLQPVDQLPKYVQPVFEGFKTLNRIQ
SRLYKAALESDENLLLCAPTGAGKTNVALLCMMREIGKHINPDGTINADDFKIIYVAPMR
SLVQEMVGNFGKRLASYNITVSELTGDHQLTREQIAATQIIVCTPEKWDIITRKGGEKTF
TSLVRLIIIDEIHLLHDERGPVLEALVARTIRMIESTQEDVRLVGLSATLPNYQDVAAFL
RVKPDSGLFHFDNSFRPVALEQQYIGVTEKKALKRYQVMNEIVYEKTMEHAGRNQVLIFV
HSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEAEQVKNHELKDLLPYGFAIH
HAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELG
ALDVLQMLGRAGRPQYDTKGEGILITNHSELQYYLSLLNQQLPIESQMVSKLADMLNAEI
VLGTIQNVRDAVTWLGYTYLYIRMMRQPTLYGIAHDHVKQDQLLEQHRADLIHTAALHLD
RSGLVKYDRKTGQFQVTELGRIASHYYCTHETMQTYNQLLKPMLSEIELFRVFSLSGEFK
NIAVREEEKLELQKLMERVPIPIKESIEEPSAKVNVLLQAYISQLKLEGFALMSDMVYVT
QSASRLMRAIFEIVLHRGWAQLADKSLALCKMIDKRMWQSMSPLRQFRKMPEEIVKKIEK
KNFPWERLYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELSTHIQPITRSMLKVELTVT
PDFQWDEKLHGASEAFWILVEDVDSEVILHHEYFLLKAKYCQDEHLVKFFVPIFEPLPPQ
YFLRIVSDRWIGAETQLPVSFRHLILPEKNFPPTELLDLQPLPITALRNEKYEGLYSDKF
PQFNPIQTQVFNSVYNGDDNIFIGAPTGSGKTTIAEFAILRLFERNPEGRCVYLVPKDAL
AELVFAEWHNKFGQNLGRKVVLLTGETGTDLKLLAKGQVIITTAEKWDVLSRRWKQRKNV
QNVNLFIVDELHLIGGEDGPVIEVVCSRMRYISSQIEKPIRIIALSASLTDYKDVAQWLG
CNANATFNFHPSVRPIPLELHVQGINNTHNASRLIAMAKPVYNAILRYSPHKPAIVFVPT
RKQARLTAIDLLTYAASEGQPNKFFHAEEEDIKPFLDRMTDKTLKETLSQGVAYMHEGLT
ASDLRLVEQLFDSGAVQIAVVTRDLCWAVNIFAHLVIIMDTQFYNGKVHAYEDYPVTDVL
QMVGRANRPLEDDDSKCVLMCQSSKKDFFKKFLSDPLPVESHLDHRLHDHFNAEIVTKTI
ENKQDAVDYLTWTFLYRRLTQNPNYYNLQGVTHRHLSDHLSELVENTLSDLEQSKCISVE
DEMDCVPLNLGMIAAYYYINYTTIELFSLSLNSKTKIRGLLEIISSAAEYEDIPVRHRED
NILRQLSQKLPNKLTSPSGGQPKFNDPHVKTNLLLQAHLCRLQLGAELQGDTETVLAKAI
RLIQACVDVLSSNGWLSPAVAAMELAQMVTQAMWSKDSYLKQLPHFNNDIIKRCTDKGVE
TVFDIMELEDDDRSKLLQLSDAQMADVAKFCNRYPNIELTYEVLDKDQIHSGSSVHVAVQ
LEREDEVSGPVIAPFFPQKREEGWWVVIGDPKSNSLLSIKRLTLQQKARVKLDFVAPSPG
HHNYTLYFMSDAYLGCDQEYKFSIDVGDFESSGSESD
NT seq
6414 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgctgcggcaaggcagctccagtatgaatataaagcgaattccaatcttgtg
ttgcaagcagatgttcgatttatcgaaagaagaagccgagatgaggcaactggagaggtt
atgtcccttgtgggcaagctgacggggacaaaaatgggtgacagagctcagagaactcgc
cctggcaaagcagaagagcgcaaagcaaaacgacagaagagagatgaagcacagtatgat
ttcgctaggatgaaaggagtaactttattgtcggagggagtagatgaaatggttggtata
atatatagacctaaaacacaagaaactcggcagacatacgaggttttattgagtttccta
caagaagctttaggtgaccaaccgagagacattctttgcggagctgccgacgaagtattg
caagttctgaaaaacgacagattaaaagaacgggagaaaaagaaggagaccgaaacatta
ttagggccaattgccgaggaaaggtttgcactgctggtcaacctgggtaagaaaataaca
gatttcggtaatgaagaaaataaagctaacaccggtgaagaaaatatcgacgaaacttat
gggatcaacgttcagtttggtggtgggtctgaagaggaagacgatgaggacatgtatgga
gaggttagggaggaaatggacgatgaggaaggcgaggaagctaaagaagacagcgctatt
cacgcagaaaatttgggtggagtggaagagatgaaaaaggaaaaagctcttcatccgttg
gacatagacgcttactggctgcaaagacggttgtccaaaatatacgacgatgcgatggtg
tcacaagccaaagctacggaggtcctgaacgttcttagagacgccggcgacgatcgcgaa
tgtgaaaatcagttggttttacttttaggttacgactgtttcgacttcataaaacagcta
aaaaagcacagacagatgattttgtactgtactctactggccaagtctcagagtgactcg
gaacgccaaaagataaaggacaaaatgtctgacgatccttcattgcatcgtatcctgaag
cttttggagacggggaaaggcgacgacgatgacgaggatgacgagtccgcctcgaggtcc
cacaggaggaagaacgattcagacgatatggacacaggaagtgctcaagtggcaggttca
aggcacctgatagatttcgaggatctggtgttccaacaggggtcccatttcatggccaac
aaaaggtgccagctgcccgatgggtctttcaggaaacagaggaaaggatacgaagaggtt
catgttcccgctctaaaacccaaacctttcggggacaatgagaaactgcaacccgtcgat
caactgccgaaatatgtacaacccgtctttgaaggttttaaaactctcaaccgaattcaa
agtagactatataaggccgcccttgaatctgacgagaatttgcttctctgtgccccaacg
ggcgccggtaagaccaacgtggcgctgttatgtatgatgagagagatcggcaagcatata
aacccggacggtaccataaacgcggacgatttcaagatcatttatgtggctcccatgaga
tccctcgtacaggaaatggtgggtaatttcggtaagcgactggcgagttacaatattacc
gtttccgagttaacgggcgaccatcagctgaccagggagcagatagcagccactcagatc
atagtttgcactcccgagaagtgggatatcattacgaggaaaggaggagagaaaacgttt
acttccttggtcaggttgattatcatagacgaaattcatcttcttcacgacgaacggggc
ccggttctggaggctttggtggccaggacgataaggatgatagaatccacccaggaggac
gtacgtttggtcggtttatccgccaccttacccaactatcaagacgtagccgccttcctt
agagtcaaacctgattccggactgttccacttcgataacagctttaggccggtagccttg
gagcagcagtacatcggcgttaccgagaagaaagccctgaagaggtaccaagtgatgaac
gagatcgtgtacgagaaaacgatggaacacgccggtcgcaaccaggtgttgatcttcgta
cactccaggaaggaaaccggcaagaccgcgagggcgatcagggatatgtgcttggaaaag
gatacgctggggcaatttctacgagagggatcggcttctatggaggtgttgcgcacggag
gcggagcaggtgaaaaaccacgagttgaaggatctgcttccgtacggtttcgccattcac
cacgccggcatgacccgcgtcgataggactttggtggaggatctattcgcagacagacac
attcaagtgcttgtgtccaccgctacgttagcttggggtgttaatttaccggcgcacacc
gtaataattaaaggcactcagatttacaacccggaaaagggtagatgggtggaactgggc
gccttggacgtgcttcagatgttgggtcgtgccggaagaccccagtatgacaccaaaggc
gagggaatactgataacgaaccacagcgagctgcagtactacttgtcgttattaaatcaa
caacttcccatcgaatcgcagatggtttctaagctggccgacatgctgaacgctgaaatc
gtactcggcacgatacagaacgtgagagatgcagtaacgtggctcggctacacatacctt
tacatacgaatgatgcgccagcccacgctttacggaatcgcccacgaccacgtcaagcaa
gaccagctgttggagcagcacagggcggatctgatccacacggcagcgttgcacttggac
aggagcggtttggttaagtacgaccggaaaactggtcagttccaagtgaccgaactcgga
aggatagcctcccactattactgcacccacgagaccatgcagacttacaaccaactgctc
aagcccatgttgagcgaaatcgagctcttcagagtgttttcattgtccggcgaattcaaa
aatatcgccgtacgcgaggaagagaagctcgagttgcagaaactgatggaacgcgtgccg
attcccataaaagagagcatagaagagcccagcgccaaagtgaacgtcctcctgcaggcc
tacatctcgcaacttaaactggaaggtttcgctctgatgtccgatatggtgtacgtcacc
cagtcagcgtcccgtttaatgagagccatattcgagatcgttctgcataggggatgggcg
cagctagcggataaatctttggctttgtgtaaaatgatcgacaagcgaatgtggcagtcg
atgtcgccgttgaggcagtttaggaagatgcccgaggaaatcgtgaagaaaatcgagaag
aagaacttcccttgggaacgattatacgacctgggtcctaacgagatcggggaactaatc
cgagtccccaaattaggaaaaaccatacacaaatacgtccaccaattcccgaaattggaa
ttatccacccacatacaaccaatcaccaggtctatgcttaaagtcgagctaaccgtaacg
ccagactttcaatgggacgagaaactgcacggggcgtcggaagctttctggatcttggtg
gaagacgtggactctgaggtcattctgcatcacgaatattttcttttaaaagcgaaatac
tgccaagacgagcacctggttaaattcttcgtaccgatattcgaaccgttaccaccgcag
tatttcctacggatcgtctcggaccggtggataggagcggaaactcagctgcccgtttcc
ttcagacatttaatcttacccgagaagaatttcccgcctacggaactcttggacctgcaa
ccgttgcccataacagcgctacggaacgagaaatacgagggcttgtactcagacaaattc
ccgcagtttaaccccattcaaacacaggtgttcaattctgtgtacaacggagacgacaac
attttcatcggagctccgacgggttccggaaagacgaccatagcagaatttgctattctg
aggttattcgagaggaatcccgagggcagatgtgtttacttggtcccgaaagacgcttta
gctgagcttgttttcgccgagtggcataacaaattcgggcaaaacctcggccggaaagta
gtgctgttaaccggggaaactggaaccgacttgaaactgctagcgaaaggtcaagttata
ataacgaccgctgagaaatgggacgtgctatccagaaggtggaagcagaggaagaacgtg
caaaacgtcaatttatttatcgtggacgagctgcatctgatcggaggcgaggacgggccc
gtaatagaagtcgtttgttcaagaatgagatatatttcctcgcaaatcgagaaacccatc
aggataatagccttgagtgcctcgttgacggattacaaggacgtcgctcagtggttgggc
tgtaatgctaacgcgacgtttaattttcatcccagcgttcgaccgattccgttagagttg
cacgtccaaggcattaataatactcacaatgcttcaagattgatcgcgatggccaaacca
gtctacaacgctattttgaggtacagcccccataagccggccatcgtctttgtgcccact
aggaaacaagcgaggctgacggcaatcgatctgcttacgtacgccgcttctgaggggcag
cccaacaagtttttccatgccgaggaagaggatatcaagccgtttttggatcgcatgacg
gataagacattgaaagagacgttgtcccaaggtgttgcctacatgcacgagggcctcaca
gccagcgatttgcgactggtagagcaacttttcgattccggggccgttcagatagccgtc
gttaccagagacttgtgctgggcagtgaacatattcgctcatctggtcatcattatggac
acacagttttacaacggaaaggtccacgcctacgaggactatcctgtcacagacgttctg
caaatggtcggaagggctaacaggcccctggaagacgacgattccaagtgcgttttgatg
tgtcagagttcgaagaaggatttcttcaagaagttcttgagcgatccattgcccgtagag
agtcacttggaccacaggctgcacgatcactttaatgcggaaatcgtcacgaaaactatt
gagaacaagcaggatgcagtggattacctaacgtggacgttcctgtatagacgtttgacg
caaaatccgaactactacaatctgcaaggggtaacgcacagacatttatccgatcatctt
tcggaactcgtcgagaacacgttgtcggatttggaacagtcgaagtgtataagtgtggag
gacgagatggattgcgtgccgttgaatctgggaatgatcgccgcttactactacatcaac
tacactacaatcgaattattcagcttgtccctcaacagcaagacgaaaatccgtggtctg
ctggaaatcatctcatcggccgccgaatacgaagacattccagtaagacaccgcgaggac
aacatcctcagacagctgtcacagaaactcccgaacaaactcacctctccctcgggaggc
caacccaaattcaacgatccccacgtcaagaccaacctcctgctccaggcgcacctctgc
aggttgcagctgggcgccgagttgcagggcgatacggaaaccgtattggccaaagccatc
aggttgatccaggcatgcgtggacgtgctgagttccaacgggtggttgtcccctgccgtg
gcggccatggagttggcccagatggtgacgcaggccatgtggagcaaggactcttatttg
aagcagttgccgcacttcaataacgacattatcaagaggtgcacggataagggtgtggaa
actgtattcgacataatggaattagaggatgatgacagatcgaaacttctacaattgagc
gatgcacaaatggccgacgtggcaaagttttgtaacagatatcccaacatcgaactgacc
tacgaggtcctggataaggatcagatccattccggatcttccgtccatgttgccgtgcag
ctggaaagggaggacgaagttagcggtccggttatcgcaccgttcttcccccagaaacgt
gaggagggctggtgggtagtcatcggcgatcccaaatccaactctctcctctccataaag
aggttgaccctccagcagaaggcgcgggtcaagttagatttcgtggcgcccagtcccggc
caccacaactacactttgtacttcatgagcgacgcttacttgggatgcgatcaagagtat
aaattttccatcgacgtgggcgatttcgagtctagcggtagcgagtcagactaa
DBGET
integrated database retrieval system
