Anoplophora glabripennis (Asian longhorned beetle): 108904620
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Entry
108904620 CDS
T07402
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
agb
Anoplophora glabripennis (Asian longhorned beetle)
Pathway
agb03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
agb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108904620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agb03021
]
108904620
03019 Messenger RNA biogenesis [BR:
agb03019
]
108904620
Transcription machinery [BR:
agb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
108904620
RNA polymerase I system
108904620
Messenger RNA biogenesis [BR:
agb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
108904620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW1_SPT5
KOW4_SPT5
KOW6_SPT5
KOW
KOW5_SPT5
Spt5-NGN
KOW2_Spt5
KOW7_SPT5
KOWx_SPT5
Spt5_N
GPKOW_C
CTD
DUF3912
DarP
GIP4
Motif
Other DBs
NCBI-GeneID:
108904620
NCBI-ProteinID:
XP_018562767
LinkDB
All DBs
Position
Unknown
AA seq
1082 aa
AA seq
DB search
MSDSEASNFSDNENASEAGSVRSRSSRGSARSQSRSPSRSPSKSRSRTPSRSRSRSPSRS
KSRSRSRSKSGSRSGSEAREASGAEEVADEEEPDGESLRSDEYDSEEDESDDARGKKRRK
KDRYGFIIDEAEVDDEVEDEDEWEEGAQEMGIVANEVDEFGPTAREIEGRRRGTNLWDAQ
KEHEIEEYLRKKYADDSAVIKHFGDGGEEMSDEITQQTLLPGVKDPNLWMVKCRIGEEKS
TCLLLMRKFLAYQNTAEPLQIKSVVAPEGVKGYIYIEAYKQPHVKTAIENVGNLRMGIWK
QQMVPIKEMTDVLRVVKEQTGLKSKQWVRLKRGLYKDDIAQVDYFDMAQNQVHLKLLPRI
DYTRLRGALRTAQSESEAEKRKKKRRPPSKPFDPEAIRAIGGEVTSDGDFLIFEGNRYSR
KGFLYKNFTLSAVIIDGVKPTLAELERFEEQPEGIDLELPTEKEDKAVTHSFSAGDNVEV
CEGELINLQGKIISIDGSMITIMPKHEDLKDALVFQANELKKYFKMGDHVKVLAGRYEGD
TGLVVRVENNRVVLISDLTMHEMEILPKDLQLCTDMASGVDSLGKFEWGDLVNLDAETVG
VIVRLERENFHVLNMHGKVVECRPGSLQKRRLNRYTAALDSYRNNLHRRDMVKVIDGPHS
GFSGEIKHLYRNFAFLHSVEFLQNGGIFVCKTKHLQLAGGNKTVPSADISTGMEFMSPRR
ASPMHPSSGGGGVVGGFGGGGGGGRGGGAGRGRVARDRDIIGTTIKITRGPYKGNIGIVK
DATQSTARIELHTSCQTISVDRNHIADVGTPAKDGSASSYGRTPAYAGNQTPLYRDTGNK
TPMCDSGSRTPLHYGSMTPIHDGSRTPNASSEWDPAVSNTYPSPGYNPSTPGFQMNGPYT
PQTPGTMYDTTYSPYQASPGYQSVVSTPSPATGYGQSPSSNNPYNTPSSGYSPNMPYNPQ
TPGANLDVLPMTDWHTVDIEVRIRDSHDDVGLVGQTGIIRSISGAMCSVFLPEEDRVVNI
MSDHLDPVRPQRGDQFKVIIGEEREQTGELLSIDVHEGVVKIKDDITMLPLQNLCKMRKV
DH
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattcggaggctagcaacttctccgacaacgaaaatgcctctgaagcgggctcc
gtgcgctccaggagttccaggggcagcgccaggagccagtctaggtccccatccagatcc
ccatcaaagagtagatccaggaccccatctcgatcgcgttctcggtctccatccaggtct
aagtccagatctaggtcaagatctaaatctggcagccgttctgggtctgaagcgagggaa
gcatctggtgcggaagaagtggccgacgaagaggaaccagacggtgaaagtttgaggtct
gacgagtacgacagtgaggaggatgaaagtgacgacgcaaggggtaagaaacgtaggaaa
aaggatcggtatgggtttatcattgacgaagccgaggtggacgatgaagtcgaggatgaa
gacgagtgggaggaaggggcacaggagatgggcatcgtggcgaacgaggtggacgagttt
ggacctacggctagggagatcgaagggagacgtagagggacgaacctttgggacgcccag
aaggaacacgagatagaggagtacctccgcaaaaagtacgccgacgacagcgccgtcatc
aaacacttcggggatggcggcgaggagatgtcagacgagatcacgcaacaaacgctcctg
ccgggcgtcaaagacccgaatctgtggatggtgaagtgtcgcatcggcgaggaaaaatcc
acctgcctgctgcttatgaggaagttcctggcgtaccagaacaccgccgagccgctgcag
atcaaatcggtggtggcgcccgagggcgtcaaaggttacatctacatcgaggcgtacaag
cagccccacgtgaagaccgccatagagaacgtcggcaacctcaggatgggcatctggaag
cagcagatggtgccgataaaggagatgacggacgtgctgcgcgtcgtcaaggaacaaacc
ggtttgaagtcgaagcagtgggtgaggctgaagaggggcctctacaaggacgacatcgct
caggtggactattttgacatggcgcagaaccaggtgcaccttaaactgttgccgaggatc
gactatacgaggttgaggggggccttgaggaccgcccagtcggagtcggaagcggagaaa
cgtaagaaaaaacgtcgcccgcccagcaaaccgttcgatcccgaggctatcagggcgatc
gggggcgaggtgacctccgacggtgacttcctcatcttcgaggggaacaggtactcccgc
aaaggctttctctacaagaatttcacgctcagcgccgtcataatcgacggcgtcaagccc
acgttggcggaattggaacgtttcgaggagcaacccgagggtatcgacctcgagctgccc
acggagaaggaggacaaggccgtgacccattcgttcagtgccggggacaacgtcgaagtt
tgcgagggagaattgattaatttgcagggtaaaatcatcagtatcgacgggtctatgatc
acgatcatgcccaagcacgaggatttgaaggacgccctggtgtttcaagctaacgagctg
aagaagtacttcaagatgggggatcacgtcaaagtcctggcggggcggtacgagggcgac
accggtctggtggtgagggtggagaacaacagggtggtgctgatctccgacctcaccatg
cacgagatggagatcctccccaaagacctccagctttgcacggacatggccagcggggtg
gattccctcggcaagttcgagtggggcgatctggtcaacctggacgcggagacggtcggc
gttatagtacgattggagagggagaacttccacgttctcaacatgcacgggaaagtggtg
gagtgccggccgggctccttgcagaaaaggaggctcaacaggtacacggcggccctggat
tcgtacaggaacaacctgcaccgcagggacatggtgaaggtcatagacgggccgcattcc
gggttctccggggagatcaagcacctgtacaggaattttgcgtttctgcattcggtcgaa
ttcctgcaaaacggcggcatcttcgtctgcaaaaccaaacacctgcagctggcgggcggg
aacaagaccgtccccagcgccgacatatccaccgggatggagttcatgtcgcccaggagg
gcgtcgccgatgcacccgtccagtggcggtggtggagttgtcggcggctttggaggcggc
ggtggtggaggaagagggggcggggcaggccggggaagggtcgcccgtgacagggacatc
atcggcaccaccatcaagatcacccgaggcccgtacaagggcaatattggtatcgtgaag
gacgccacgcagtccaccgccaggatagagcttcacacgtcgtgtcagacgatatcggtg
gaccgcaaccatatcgcggatgttggcactcccgcgaaggacggaagcgcctccagttac
ggaaggaccccggcgtacgcgggcaaccaaacacccctgtaccgagacaccggaaacaaa
acgcccatgtgcgattccggctcgcgtactcctttgcattacggttcaatgacgcccatc
cacgacggctccaggacccccaacgccagttccgagtgggatcccgccgtttccaacacc
tacccgtcgcccggttacaatccaagtactcccggtttccagatgaacggcccgtacacc
cctcagactcccggaacgatgtacgacacgacctacagtccctaccaggccagtcctggg
taccagagcgtcgtttcaacgcctagtcctgccacggggtatgggcagtcgccctccagt
aataacccgtacaacacgcccagctccgggtacagccccaacatgccgtacaacccacag
actcccggcgccaatttggacgtgttgccgatgaccgactggcataccgttgatatcgag
gtgcgcatccgagacagccacgacgacgtgggcttggtgggccagacgggcatcatcagg
agcatctcgggcgccatgtgctccgtcttcctgcccgaagaggacagagtggtcaatatc
atgtccgatcacctggatcccgtcagaccgcagaggggggatcagtttaaggttataata
ggcgaggagagggagcagacgggagaactactctcgatagacgttcacgagggggtcgtg
aaaatcaaggatgacataacgatgttgccgttgcaaaatttgtgcaagatgaggaaggtg
gatcactag
DBGET
integrated database retrieval system
