Anoplophora glabripennis (Asian longhorned beetle): 108904676
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Entry
108904676 CDS
T07402
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
agb
Anoplophora glabripennis (Asian longhorned beetle)
Pathway
agb03020
RNA polymerase
agb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
agb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108904676
09124 Replication and repair
03420 Nucleotide excision repair
108904676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agb03021
]
108904676
03400 DNA repair and recombination proteins [BR:
agb03400
]
108904676
Enzymes [BR:
agb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108904676
Transcription machinery [BR:
agb03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
108904676
DNA repair and recombination proteins [BR:
agb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
108904676
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
108904676
NCBI-ProteinID:
XP_023311111
LinkDB
All DBs
Position
Unknown
AA seq
1897 aa
AA seq
DB search
MAATDSKAPLRTVKRVQFGILSPDEIRRMSVTEGGIRFPETLEAGRPKLCGLMDPRQGVI
DRNSRCQTCAGNMTECPGHFGHIDLAKPVFHVGFVTKTIKILRCVCFFCSKLLVSPNNPK
IKEVVMKSKGQPRKRLAFVYDLCKGKNICEGGDEMDVGKEGEEQVPGKKQGHGGCGRYQP
NIRRSGLDLTAEWKHVNEDTQEKKIALSAERVWEILKHITDEECFILGMDPKFARPDWMI
VTVLPVPPLAVRPAVVMFGSARNQDDLTHKLADIIKANNELQKNEAAGAAAHIITENIKM
LQFHVATLIDNDMPGMPRAMQKSGKPLKALKARLKGKEGRIRGNLMGKRVDFSARTVITP
DPNLRIDQVGVPRSIAQNMTFPEIVTPFNFDKMLELVQRGNSQYPGAKYIIRDNGERIDL
RFHPKPSDLHLQCGYKVERHIRDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCT
SPYNADFDGDEMNLHVPQSMETRAEVENLHITPRQIITPQANKPVMGIVQDTLTAVRKMT
KRDVFIEKEQMMNLLMFLPIWDGKMPRPAILKPKPLWTGKQLFSLIIPGNVNMIRTHSTH
PDDEDDGPYKWISPGDTKVMVEHGELVMGILCKKTLGTSAGSLLHICMLELGHEVCGRFY
GNIQTVINNWLLLEGHSIGIGDTIADPQTYLEIQKAIKKAKEDVIEVIQKAHNMELEPTP
GNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACVG
QQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLID
TAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLCGEMVEFQTLPTV
KLSNKAFERKFKFDPSNEKYLRRVFNEEVIKQLMGSGEVISELEREWEQLQKDREALRQI
FPSGESKVVLPCNLQRMIWNVQKIFHINKRAPTDLSPLRVIQGVRELLKKCIIVAGEDRL
SKQANENATLLFQCLVRSTLCTKCVSEEFRLSTEAFEWLIGEIETRFQQAQANPGEMVGA
LAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGAAAR
DAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQNTVIPEDQEFVNVYYEMPDFDPTRISP
WLLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDDGKF
GEGADEDVDKMDDDMFLRCIEANMLSDMTLQGIEAISKVYMHLPQTDSKKRIVITETGEF
KAIAEWLLETDGTSMMKVLSERDVDPVRTFSNDICEIFSVLGIEAVRKSVEKEMNAVLQF
YGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLMDAASHAEV
DPMRGVSENIILGQLPRMGTGCFDLLLDAEKCKMGIPIPQAHGGDMTSGMFFGSAATPSS
MSPGGAMTPWNQGATPYVGSAWSPQNLMGSGMTPGGPAFSPSAASDASGMSPAYGAWSPT
PQSPAMSPYISSPHGQSPSYSPSSPAFQPTSPSMTPVSPGYSPSSPGYSPTSPNYSPTSP
SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTCPSYCPTSPSYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPR
YTPASPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPTSPSFAGGSPQYSPT
SPSYSPTSPSYSPSSPQHTPAASSRYSPSSPNYSPSSPSYSPTSPQYSPHSTKYSPTSPT
YTPTSPSYSPASPAYSPQPPRYSPSSPSYSPTNQDQD
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atggcagccacagatagcaaagctcctctcagaacggtgaaaagagtacagtttggtatc
cttagtccagatgaaattagacgtatgtcagttaccgaaggcggtatccgctttccagaa
accttggaagcgggccgtcctaagctctgtggacttatggacccgagacagggtgtcatt
gacagaaattctagatgtcagacgtgtgccggtaacatgacagaatgtcccggccatttc
ggacacattgacttagctaagcctgtattccacgtaggattcgtaacgaaaacaataaaa
atactacgctgcgtctgtttcttttgcagtaaattactagttagcccgaataatccaaaa
ataaaagaagtcgtaatgaaatccaaagggcaaccaaggaaaagattagcctttgtatac
gacttatgcaaaggtaaaaatatttgcgaaggtggagacgagatggacgttgggaaagaa
ggtgaggaacaagtaccaggtaaaaagcagggccacggcggttgtggtcgttaccaaccg
aatataagaaggtcgggcttggacttgaccgctgagtggaaacacgtgaatgaggatacc
caggagaaaaaaattgctctgtcagcggagagagtttgggaaatacttaagcatatcaca
gacgaagagtgtttcattctgggtatggaccccaagtttgcccggcccgattggatgatc
gtgacggtattacccgtacctcccttagcagtacggcccgcagtcgttatgttcggttca
gccagaaatcaagacgatttaacgcacaaactggccgacatcataaaagcgaataacgag
ctacagaaaaacgaagcggccggcgccgctgctcatataatcacggagaatattaaaatg
ttacagtttcacgtcgccactttgatagacaatgacatgcccggcatgccgagagctatg
cagaagtcgggtaagccgctgaaagccttaaaagctcggttaaaaggtaaggaaggtcga
atacgtgggaaccttatgggtaaacgtgtggatttctccgcccgtacggtcatcacgcct
gatccgaacctgcgtatcgatcaagtaggagttccgagaagtatcgcccagaacatgacg
tttccggagatagttacgccgttcaatttcgataagatgttggagttggttcagagggga
aattcgcaatatcccggtgcgaaatacatcataagggacaacggtgagaggatcgatctt
cggttccatccgaaaccgtccgatttacatttacagtgcggttacaaggtggaaagacac
attcgcgacggggacttggtaatcttcaaccgtcagcccacgctgcacaagatgagtatg
atggggcacagggtgaaagttctgccctggtcgacgttccgcatgaatctctcctgtacg
tccccgtacaacgccgatttcgacggggacgagatgaacctccacgttccgcaaagcatg
gaaactcgggccgaagtggagaacttacatatcacgcccaggcagatcatcacgccccag
gctaacaaacccgtcatgggtatcgtacaggacacgctcactgctgtccgaaaaatgacg
aaacgtgacgtttttatcgagaaggaacagatgatgaatctgctcatgttcttgcccatt
tgggacggtaagatgcccagaccggccattttgaagccgaaaccactctggacgggaaaa
cagttgttttcgcttatcattcccggtaacgttaacatgatcaggactcattccacgcat
ccagacgatgaagacgacgggccgtacaagtggatatcgcccggagatacgaaagtaatg
gtggaacacggcgaattggtcatgggtatcctgtgcaagaagaccctcggtacttccgca
gggtctctgcttcacatttgtatgttggagttggggcacgaggtctgcgggaggttttac
ggaaacattcaaactgtaatcaacaactggttgttgctggaaggtcatagtatcggtatc
ggtgacacaattgccgatcctcagacgtacttggaaattcaaaaagccattaaaaaagcc
aaggaggatgtaatagaagtcatccagaaagcgcacaacatggagttggagcctaccccg
ggtaataccctacgtcagacgttcgagaaccaagtaaacaggattctgaacgatgctcgt
gacaaaaccggcggttctgccaagaaatccttgacggaatacaataacttaaaggctatg
gtggtatcgggatccaaaggatctaacattaacatttctcaggttatcgcttgtgtgggg
caacagaacgtagagggtaaacgtatcccgttcggcttcaggaaacgtaccttgccgcac
ttcatcaaagacgattacggtcccgaatctaggggattcgtagaaaattcgtatcttgca
ggactgaccccgtcagagttctatttccacgccatgggaggtcgtgagggtctcatcgat
accgccgtaaaaaccgccgaaaccggttacatccagcgtcgtctgataaaggctatggag
tccgtgatggtgcactacgacggcaccgtcagaaattcggtcgggcagctcatccagttg
cgttacggggaggacgggctgtgcggcgagatggtagaatttcaaacgctaccgaccgtg
aaattgagcaacaaagcgttcgagaggaagttcaaattcgacccgagcaacgagaagtac
ctccgcagggttttcaatgaggaagtcattaaacaactcatgggatctggcgaggtgata
tccgagctggaacgggagtgggagcaactgcaaaaggaccgcgaggctctcagacagatc
ttcccgagcggcgaatcgaaagtcgtacttccctgcaacctacaacgcatgatttggaac
gtacagaaaatcttccacatcaacaagcgggcccccaccgacctctcccccttgagagtc
atacagggcgtgagagagctcctgaaaaaatgcataatagtggcgggagaagatcgtctc
tctaagcaagccaatgaaaacgccacgctcctcttccagtgtctcgtgaggtccaccctg
tgcacgaaatgcgtatcggaggagttcaggctcagcacggaggctttcgagtggttgatc
ggtgaaatcgagacgcgattccaacaggcccaggccaaccccggcgaaatggtcggcgcc
ctcgccgcccagtccctcggcgaacccgccactcagatgaccctgaacactttccatttc
gctggtgtatcttcgaagaacgtaaccctcggcgtgccccgactcaaggaaatcatcaac
atctccaagaaaccgaaagctccgtctcttacggtattcctaacgggcgctgccgctagg
gacgcagagaaagccaagaacgtcctctgccgactggaacacaccaccttgaggaaggtc
accgccaacaccgccatttactacgatcccgacccgcaaaacaccgtcatccccgaggac
caggagttcgtcaacgtgtactacgagatgcccgatttcgacccgaccaggatatcgccc
tggttgctgcgtatcgaactcgacaggaaacgtatgacagacaagaaactcaccatggaa
cagatcgcggagaagataaacgccggtttcggcgacgatctcaactgtatcttcaacgac
gacaacgccgagaagttggtgttgcgtatacggataatgaacagcgacgacgggaagttc
ggggagggggcggacgaggacgtggataagatggacgacgacatgttcctcaggtgtatc
gaggccaacatgctcagcgacatgacgttgcagggtatcgaggccatttccaaggtgtac
atgcacctgccccagacggactcgaagaaacgcatcgttattaccgaaacgggagaattc
aaagcgatagcggaatggttgctggaaactgacgggacgagtatgatgaaggtgttgtcc
gagagggacgtcgatccagtcaggacattttccaacgacatttgtgaaatattttcggtg
cttggcatcgaagccgtacgtaagtcggtcgaaaaagagatgaacgccgtactgcagttc
tatggcctgtacgtaaactaccgacatctggccttactttgcgacgtgatgacagcgaaa
ggtcatctcatggccattacccgtcacggcataaacagacaggataccggagccttgatg
aggtgttccttcgaggaaaccgtcgatgtactgatggacgccgcctcgcacgccgaagta
gacccgatgaggggcgtgtccgagaatattatccttggtcagttgcctcggatgggtacc
ggctgtttcgatctgttgctggatgccgagaagtgtaaaatgggcattcctattccacaa
gcgcacggcggcgatatgacttcggggatgttcttcggttcggccgctacgcctagcagt
atgagccccggtggggccatgactccatggaatcaaggggctactccatatgttggaagt
gcttggtcgccacaaaatctaatgggaagcggcatgacccccggtggtccggcattctcg
ccttctgccgcttcggacgcatcaggaatgtcgccagcttacggagcatggtccccgaca
cctcagtccccggccatgtctccttatatatcgtcaccacacggtcaatcaccgtcatac
agtccttccagtccagctttccaacccacatccccatccatgacacccgtttctccgggt
tattccccgagttcccccggatattccccaaccagcccgaattacagcccaacgagcccc
agttattcacctaccagtcctagttactctccaacttctccttcatattctccgacaagt
cctagttattctccgacgagtcctagttattctccaacttccccgagttattctcctact
tgtcccagttactgtccgacttctccgagttactcccctacttctccaagctacagtcct
acttctcccagttactctccaacttctccttcttacagcccaacctcgccaagttattcc
cctacgtctccttcatacagtccaacttctccgagttattctccaacttctccaagttac
agtcctacttctccaagttattctccaacttcgcctagttattctccctcttctccgaga
tacaccccggcatcgcccagttattcgccaacgtctccatcttattccccatcttctcct
caatattccccggcttctccgagttattccccgtcttctccaaaatattcccctacttcg
ccgagttactcacctacttcaccgtcgtttgccggtggaagtcctcaatattctccgact
tctccgagctattcgcctacttctcccagttattctccatcgagtcctcagcacacgcca
gcggcaagttctagatattccccatcttctcccaactattcgcccagctctcccagttat
tcgcccacttctcctcaatattctcctcacagtacaaagtattctcccacttctcctact
tatacacctacgagtcctagttactcgccggcgtctcccgcgtattcgcctcagccacct
agatattcaccttcgtcacctagttactcgcccacaaaccaggatcaggattga
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integrated database retrieval system
