Anoplophora glabripennis (Asian longhorned beetle): 108904716
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Entry
108904716 CDS
T07402
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
agb
Anoplophora glabripennis (Asian longhorned beetle)
Pathway
agb03440
Homologous recombination
agb03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
agb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108904716
03450 Non-homologous end-joining
108904716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agb03032
]
108904716
03400 DNA repair and recombination proteins [BR:
agb03400
]
108904716
DNA replication proteins [BR:
agb03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
108904716
DNA repair and recombination proteins [BR:
agb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
108904716
BRCA1-C complex
108904716
NHEJ (non-homologous end-joining)
MRX complex
108904716
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
AAA_15
SMC_N
AAA_21
Rad50_zn_hook
SbcC_Walker_B
AAA_29
PUMA_CC
ABC_tran
Motif
Other DBs
NCBI-GeneID:
108904716
NCBI-ProteinID:
XP_018562883
LinkDB
All DBs
Position
Unknown
AA seq
1306 aa
AA seq
DB search
MALLQSLQICGVRSFSPDTVETIYFNTPVTLFLGQNGSGKTTIIESIRFALTSELPAGSS
NGQGFVNDPKISNKSSTKASVKIKFLDCQGHEITVSRFMLVSTKAGGGLTFKKLAVHVRK
RDKDEPGNPKDISGRCIDIDNYCSTALNVSKSILNNVIFCHQENSAWPLDEPKKLKEKFD
EIFDAVKYNKCVETFRKYIKEKQNNVKVLKERLSTKKLIKDEVERKRGRYNEKNDKLTEV
NDRIKERETKLNPMDDRMEEILNLEVSISTLQRKLTGKETEKKGVIEQQDTIKEHISYVF
EGSDEELANKMVSFQEEQEAEKTRIIELENRSKEINAKNDELKENMQKIQVKIGELKEEQ
KQHNQRIAENKTLLEKTASKLEITISPDSKEDKSIISDIKQALKASEKAFEDLVKQIDLE
EKNLQNEIDNTREKYVKTKQMISSKNDLIEESQKKIKDINCKLEELDTSDSQLTIIADNI
KKLQVTLTNLKNSFNENEKLSEIEEMKELIQEKENYLRKLERENRILQQNYATEQKIDRE
KSLVIEKQGEVNRIKTKHLQNLQELFGENVPEKNLRKSVTEIQNKADAKYKTITNTINEL
QKKVTTLETNIRHQKDKLESSRKELDTDKKKVEDLCLGRPFNEVLTENYNKKEKLQKDKG
QYSSAKIMYEAFINKFERESPCCPICQTDFSEKKSIVKDIIQDLKKKIERIPLQLIQIEK
DLKTTEENYNKLQQLKPVNDNIEMLTNAKIPLMEEELINLRTKYDTFSEQLRSERNNSTA
PQNTIEVCKSMITDVTLLDQYMSDMEKSNNFLAELESTIVNVPSNRSRQETEAEIDSVNA
ELKNHRSQYDSNKTMVDSHRDRCQRLNNNIQTETQRQIEMQKLVQQKPLLEVQKEEYTEK
LMVLKMEIQEHGDVLNNLKGDLAKVTEERQNTVMNNRKVKEEKQSEIMAVKNMIAEINKL
QKQIDLYVKNNNNAKLEEAIAELADLKTKEKKLEDTKVAITEIISTKKQNLAKQQINFRA
LKDNETLREKQKLEMRLETEIVNLKKQIGDYNIKSIYEEKQRLQRKIESHHKEISTLKGQ
EEEMKKQLSEMESDLEKPDNKNAFNNYKKQYYELRVNEVAIKDLSNYVGVLERSVLQFHK
ERMVQINKIIRELWRNIYRGNDIDYIEIKTDECMTGGVNRRRTYNYKVVQIKKGVELEMR
GRCSAGQKVLACLVIRMALAETFSAHCGILALDEPTTNLDRENILSLSDALSRIIATREK
EKNFQLLIITHDEEFLNTLTRVQSLDCYWKVKRNEEGFSKLQKEFL
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atggcgttactgcaaagccttcaaatttgcggcgtaaggagtttcagccctgatactgtc
gagactatttactttaatactccagtgacgctattcctgggtcagaatggcagcggaaaa
accacgatcatagaaagcattagattcgccctaaccagtgagttgccagctggatcgagc
aacggccagggtttcgttaatgatccgaaaatatctaataaatcctccacaaaggccagc
gtaaaaataaagtttttggattgccaaggacacgaaataacagtatcgaggttcatgttg
gtgtctacgaaagctggaggaggtttgacgttcaaaaaattggctgtgcacgtccgcaaa
cgggataaagatgaacctggtaatccaaaagatatttctggaaggtgtatagatattgat
aattactgttctacagccttgaatgtttccaagtccatattgaataatgtcattttttgt
catcaagaaaattccgcttggcccttagatgaacccaaaaagcttaaggaaaagtttgat
gaaatattcgacgccgtcaaatacaataagtgcgttgaaacgtttaggaagtacataaaa
gaaaaacagaacaatgtaaaggttcttaaagaaagactttcaacaaaaaaattgataaaa
gacgaagttgaaaggaagagaggcagatacaatgaaaaaaatgataagttgactgaagtt
aatgataggatcaaagagagagagactaagcttaaccctatggacgatagaatggaagaa
attttaaatttggaagtttctatcagtactttacagaggaaattgactggaaaagaaacg
gaaaagaaaggagttattgagcagcaggacactataaaagaacacatctcgtacgtattt
gagggatctgatgaagaattagcaaataaaatggtatctttccaagaagaacaagaagcc
gagaaaactagaataatagagctagaaaatcgtagtaaagaaataaatgctaaaaatgac
gaactgaaagaaaatatgcagaaaatacaagttaaaattggggaacttaaagaagaacaa
aagcaacataatcagagaattgcagaaaataagacgttactagaaaagacagcatcaaaa
ctagaaataaccatctcccctgatagcaaagaagataaatcgattatatctgatataaaa
caagctttgaaggcgtctgaaaaggcgtttgaagatttggttaaacaaattgatttggaa
gagaagaatttacaaaatgaaatcgataacacgagagaaaaatacgttaagacaaaacag
atgatttcgtcaaagaacgacttaatagaggaatctcagaaaaaaatcaaagacatcaat
tgcaagttagaggagctggatacttccgattcccaactgacgattatagcagataacata
aaaaaacttcaagtcaccctaacaaacttaaaaaattctttcaatgaaaacgaaaaacta
agcgagatcgaggaaatgaaagaacttatccaagaaaaagaaaattatctgcgcaaactc
gaaagagaaaacaggattttgcagcaaaattacgcgaccgagcaaaagatcgatagggaa
aagtcgctcgttattgagaaacaaggggaagttaacaggattaaaactaaacacctacaa
aatttgcaagagctgttcggcgaaaacgtgcctgagaaaaacttaaggaaatccgtgacc
gagattcaaaataaggcagatgccaaatacaaaacaattaccaacaccataaacgagttg
cagaagaaagttacaactctcgaaacgaacattcgacatcaaaaagacaaactggaaagc
tcccgtaaagaattggataccgacaaaaaaaaagtggaagatctttgcttgggaagaccg
tttaacgaagtccttaccgaaaactacaataaaaaggagaaactgcagaaggacaaaggg
cagtacagttccgcaaaaattatgtacgaagccttcattaacaaattcgaaagagaatcg
ccttgctgtcccatatgccagacggatttctctgaaaaaaaatccatcgtcaaagacatc
atccaagacttgaagaaaaaaatcgagagaatccccctacaactaattcaaatcgagaag
gacctgaagaccaccgaggaaaattacaacaaactgcaacaactgaaaccggtgaacgac
aacattgaaatgttaacaaacgcaaaaatcccgctgatggaggaagaactcattaaccta
agaacaaaatacgacactttttccgaacagttacgctcggaaaggaacaattccacggcc
ccgcaaaacacgatcgaagtttgtaaatctatgataacagacgtgaccctactggaccaa
tacatgtcggacatggaaaaatccaacaactttttggccgaattggaatctaccatcgta
aacgtaccatctaatcggtcgagacaggaaacggaggcagaaatcgacagtgtcaatgcc
gagcttaagaatcacaggagccagtacgattcgaataagacgatggtcgattcgcaccga
gacagatgtcagaggttaaataataacatacagactgaaacgcagaggcagatagagatg
caaaagttagtgcaacagaaaccgctcctcgaggtccaaaaagaagagtacacggagaag
ctaatggtgctcaagatggaaatacaggaacacggtgacgttttaaataatctcaaagga
gacttagcaaaagtcacggaagaaagacaaaacacggttatgaacaacagaaaagttaag
gaagaaaaacagagcgaaataatggccgttaagaacatgatcgcggaaataaataaatta
caaaaacaaatcgacttgtatgtgaagaataacaataacgccaaactagaagaggccatc
gcggaattggcggatctgaaaacgaaggagaagaaactcgaagatactaaagtcgccatc
accgaaattatatccacgaaaaaacagaatctcgccaaacaacaaattaacttcagggca
ctcaaagataacgagaccctgcgcgaaaaacaaaagttagagatgaggctggaaacggag
attgtcaacttgaagaaacaaataggcgactacaacattaaatctatatacgaggagaaa
caaagactgcaacggaaaatagagagccaccataaggaaatcagcacgttaaagggccaa
gaagaagagatgaagaagcagctgtcggaaatggagagcgatttggaaaagcccgacaac
aaaaacgccttcaataactacaaaaagcaatattacgaattgagagtaaacgaagtcgcc
atcaaggatttaagcaactacgtcggcgttttggaacgatccgtgttgcagttccacaag
gaaaggatggttcaaatcaataaaattatcagggaactttggaggaacatatacaggggc
aacgatatcgattacatagagatcaagacagacgagtgtatgaccggcggagtgaacagg
agacgcacttataactataaggtcgttcaaataaagaagggtgtggaactggagatgaga
ggcaggtgcagcgcggggcagaaggttctggcgtgtttagtgattcgtatggcgctggcc
gaaacgttcagcgctcattgcggaatattggcgttggacgaacccaccacgaatttggac
agggaaaatattctcagcttgagcgatgccttgtcgcggataatagccactagggagaaa
gaaaaaaattttcagcttctgattattactcacgatgaagaatttttaaacactttaacc
agggtgcagagtctcgactgttattggaaagtgaagagaaacgaggaaggattttctaaa
ctccagaaggagttcttgtaa
DBGET
integrated database retrieval system
