Anoplophora glabripennis (Asian longhorned beetle): 108907403
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Entry
108907403 CDS
T07402
Name
(RefSeq) TFIIH basal transcription factor complex helicase XPD subunit isoform X2
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
agb
Anoplophora glabripennis (Asian longhorned beetle)
Pathway
agb03022
Basal transcription factors
agb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
agb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108907403
09124 Replication and repair
03420 Nucleotide excision repair
108907403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agb03021
]
108907403
03036 Chromosome and associated proteins [BR:
agb03036
]
108907403
03400 DNA repair and recombination proteins [BR:
agb03400
]
108907403
Enzymes [BR:
agb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
108907403
Transcription machinery [BR:
agb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108907403
Chromosome and associated proteins [BR:
agb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108907403
DNA repair and recombination proteins [BR:
agb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108907403
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DEAD
nSTAND3
AAA_11
UvrD-helicase
NAMPT_N
Exog_C
Motif
Other DBs
NCBI-GeneID:
108907403
NCBI-ProteinID:
XP_018566585
LinkDB
All DBs
Position
Unknown
AA seq
759 aa
AA seq
DB search
MRISVDGLIVYFPYDYIYPEQYSYMCELKKALDAKGHCLLEMPSGTGKTTTLLSLIVAYM
LENPHDVRKLIYCSRTVPEIEKVMEELKKLLSYYEKLDGQYPSLTGVVLSSRKNLCIHPA
VSTEREGKIVDGKCHSLTASYIRERHNYDDTTPVCQFYEGFALDGKESTMPYGVYSLDDL
KQYGRDRNWCPYFLARFAITYANIVVYSYHYLLDPKIAEVVSKELTKEAVVIFDEAHNID
NVCIDSMSVKIHKRTIERATANIQLLEKTVAEMRDDDHKKLQDEYQRLVEGLRDATVARE
TDVILSNPVLPDEILQEAVPGNIRNAEHFISFLKRFVEYLKTRLRVQHVVQESPVGFLKD
VQAKVCIERKPLRFCAERLACLLKTLEISDLTDFSPIILITHLATLVSTYMKGFTIIVEP
FDDKTPTVSNPILHFSCLDSSIAIKPVFDRFQTVVITSGTLSPLDMYPKILNFHPVIMAS
FTMTLARPCLLPMIVSKGNDQVAISSKFETREDNAVIRNYGQLLVEIAANVPDGIVCFFT
SYLYLESVVASWYDQGVIDSLQRYKLLFIETQDSAETSFALMYYIKACESGRGAVLLSVA
RGKVSEGVDFDHHLGRCVLMFGIPYVYTQSRILKARLDYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGIMIFADKRFARADKRSKLPKWIQEHLRDSLCNLSTEEAVQMAKRW
LRQMAQPFTREDQLGVSLLTLEQLEDLEAKKVQEQSEEV
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcagcgttgatggtctgattgtgtatttcccttacgattatatttaccccgaa
cagtattcttacatgtgtgaattgaaaaaggcgttagatgctaagggtcactgtttgctg
gaaatgccttcgggtactggtaaaacaacaacgttgctgtctttaattgttgcttatatg
ctggaaaatccacatgatgtaagaaagttaatctactgttcccggacggtgcctgagatt
gaaaaagttatggaagaattaaaaaaacttcttagttattatgaaaaattagatgggcag
tatcccagcttaactggagtagtattatcttctagaaaaaatctctgcatacatccagcg
gttagtactgaaagggaaggtaaaatagtcgatggaaaatgccattcactgacagctagc
tacatacgagaacgtcacaattatgatgatactacgcctgtatgtcagttttatgaaggt
tttgcactggacggaaaagaaagtactatgccatacggagtctatagtctagacgactta
aaacagtatggaagggacaggaactggtgtccatactttttggctagatttgcgattacc
tatgccaatattgtagtatacagttatcattacttattggacccaaaaattgcagaggtg
gtatcaaaagaactaacgaaagaggccgttgtaatttttgacgaggctcacaatatagat
aatgtatgcattgactcgatgagcgtaaaaattcataagaggaccatcgagagagccaca
gcaaacattcagttgttggaaaagactgtcgcggagatgagggacgatgatcacaaaaaa
cttcaagacgagtaccagaggttagtcgaaggcctgcgagatgccactgttgcgagagag
acagatgtaatcctttcaaaccctgttttacccgatgagatattacaggaagctgtaccg
gggaatataaggaatgcggaacactttataagttttcttaaacggttcgttgagtaccta
aagactaggttgcgggtacagcacgtcgtacaagaatcgccggtaggttttcttaaagat
gtacaggctaaagtgtgtatcgagaggaaaccgctgagattttgcgctgaacgcttggca
tgtctattaaaaacactagaaatatcggatcttacagacttcagcccaattattttaata
acacacttagctacactggtttcgacgtacatgaaaggtttcacgataatcgtcgagccg
tttgacgataaaaccccaaccgtctcgaatcctattctacattttagctgtttggattca
tctatagcgattaaaccggtttttgacagatttcaaacagtggtgataacttccggtacc
ttgtcgccattggatatgtatcccaagatattaaatttccatcccgtcattatggcatct
ttcacgatgaccttagcaaggccgtgtcttctgccaatgattgtttcgaagggcaacgac
caggtggctatttcttccaaatttgagactagggaggacaatgctgtgatcaggaactac
gggcaactactcgtagagatcgctgcaaacgttcccgatggcatcgtttgcttcttcacg
tcctacttatatctggaatctgtggtcgccagctggtacgatcaaggtgttatagacagc
ttgcagcgctacaaactgttgtttatcgaaactcaagactcggcagaaactagcttcgct
ctgatgtactacataaaagcttgcgagtctggtagaggagcggttctgctgtccgtggcc
agaggtaaggtgtcggaaggggtagatttcgaccaccacttgggccgatgcgtgcttatg
ttcggcataccctacgtttacacccagtccaggatactaaaagccagactggattatctg
cgggaccagttccagatccgtgagaacgactttttaacgttcgatgcaatgcgacatgcc
gcacagtgtgtgggaagggccattcggggtaagacggactacggtatcatgatcttcgcc
gataagagattcgcgagggccgataagagatccaagttgccgaagtggatacaagagcat
ttgagggattcgctctgcaatttgtcgaccgaagaggcggttcagatggcaaaaagatgg
ttaaggcagatggcgcagcctttcacgagagaagaccagctgggcgtttctttacttacc
ttggagcagttggaagacttggaggcgaaaaaagttcaagaacaatccgaagaagtttaa
DBGET
integrated database retrieval system
