Anoplophora glabripennis (Asian longhorned beetle): 108909457
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Entry
108909457 CDS
T07402
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
agb
Anoplophora glabripennis (Asian longhorned beetle)
Pathway
agb04512
ECM-receptor interaction
agb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
agb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108909457
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108909457
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
agb04147
]
108909457
00536 Glycosaminoglycan binding proteins [BR:
agb00536
]
108909457
Exosome [BR:
agb04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
108909457
Glycosaminoglycan binding proteins [BR:
agb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108909457
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
108909457
NCBI-ProteinID:
XP_023310448
LinkDB
All DBs
Position
Unknown
AA seq
2027 aa
AA seq
DB search
MTDHGLGFLVILIGLWGCVSGQFVSSYTAENRTGLYGRNYDRERARYYNAHNRGGSRVPP
GYYRSSDADSINPQEHPTYETREEYQRGDQDPIESENINSSLNGYESSRGGYESSERRET
PQRGYGESGDVDTRYDSSSSSSTLFYNSRENGREYSTNSPNLSQGSGQSSYGYESSGGQS
GSASLDGQYGGQSGSSSNDEQSRSSSYGGQSGSPSYRGQSGSASYNGQSGSGSYSGQSGS
AAYSGQSGSSSYGSQSGSQSASYGSQSGSYGSQSGQSSGPYGSYDSSPYQNRRPYASSYD
IVEAPGSAYGIRNGSDKCIPKCFAEKGNRGFPGIPGIPGDKGHRGFPGEEGLAGEKGAKG
EQGPMGPRGPKGERGRTGVPGFPGINGIPGIQGPSGPPGIPGLDGCNGTDGLPGIDGLPG
EPGPRGYPGTFGIKGQKGEAAHCESYLKGQKGEPGRDGVTGPAGHPGPLGPPGPSGPQGS
PGDVGPRGPPGSKGLKGSMGVGFYGAKGEKGVPGPRGAPGEPACGEKKSNGGHIGPRGEQ
GMKGDRGEFGLPGQKGEPGPDGDYGIPGGVGMKGEKGLPGAPGPRGRDGFAGPPGPPGQK
GDRGLEGLPGLAGRPGLKGEPGRDGPPGLVGLTGPPGPPGGGKGFPGAPGPQGPRGYPGP
MGPKGMDGFPGDPGPRGPVGPSGGPGLPGTPGPEGVPGEKGQKGESGSIGFPGSDGARGF
PGPVGPQGAPGLPGEKGLSIMGPKGEDGDSGRDGEKGQKGEKGFSGPRGAPGDALNGIPG
FTGPSGPQGEKGNAGRPGIPGSSGRPGEKGDIGGRCIDCLPGVKGDKGDRGFDGRDGDIG
PRGPPGSPGFRGLSGQDGVPGRDGPPGKPGRDGNDGLPGLSGAPGKDAVIPESLKRPLKG
EPGARGDVGPPGPSGLPGPIGPKGEIGLTGLPGPKGDKGYTGFPGLDGRSGEPGIPGAKG
EKGISIKGDIGEMGLKGDKGEVGVSGYPGRKGEPGRCPLDTIYPPQKGSKGLKGDKGIAG
FPGRDGEPGFKGDTGSPGFPGPKGELGPPGPVGKRGLPGPRGDKGEVGPMGFPGEPGRDG
ASGLPGLRGLQGQKGEAGIPGIGPPGPPGPIGIKGEKGLPGFPGKTGPPGNDGFPGIMGE
KGDIGNSGLNGLTGPPGEKGEPGPLGPPGIDGIPGRPGPEGAKGEPGLKGEIGRSGLPGF
PGPKGEYGIPGGQGPKGFKGSLGRPGAPGAPGMDGIPGLIGEKGERGYPGPIGPQGLIGM
PGEVGFSGEKGDIGPFGPPGVPGSPGVPGFKGEDGIPGLPGRKGEPGAVSEKGQKGEPGM
PGLRGPDGLPGQRGFQGLKGDSGQPGRSIAGIPGEKGDTGPPGLDGLPGVNGIKGDRGFD
GIPGSKGDRGFPGDRGPPGIDGMDGFSGEKGDKGYPGAPGFSGEKGDKGFSGINGYDGPK
GERGSPGPVGPVGFPGPKGDFGERGPPGPLIQMKGEKGEPGPSGLIGRTGEKGDTGYIGQ
PGLPGEKGDIGLPGIAGSPGLPGIPGPKGDAGYPGAAGLPGLTVKGEKGLPGFPGKNGRE
GAPGLTGEKGERGLQGLPGQTGPSGPPGPLGLQGQKGDRGFDGVPGPVGPVGPPGLPGID
GSEGPLGEKGDRGLPGLIGSPGEKGDRGLTGVAGIPGLPGEKGDRGFDGRPGLPGPIGPS
GIKGDEGLTGTPGLPGALGMKGQKGEPAPPGFPGPKGDRGYPGVAGIPGERGSPGIDGIP
GLPGQVGEKGDRGFAGIPGSPGLVGEKGDRGFEGAIGLQGAIGEIGQKGEPGIPCTNVPD
YLTGTLLVRHSQSREIPQCESGHIRLWEGFSLLYVEGNEKAHAQDLGFAGSCIRKFSTMP
FVFCDYNNVCHYASRNDKSYWLSTSAAIPMMPVAEHEIEEYISRCVVCEAPANVIAVHSQ
SLTLPDCPYGWSSLWIGYSFVMHTAAGAEGGGQSLSSPGSCLEDFRATPFIECNGAQGTC
HYFANTLSFWLATIETNQQFEKPQKQTLKAGNVRNRISRCQVCIRNT
NT seq
6084 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccatggactagggttcctggtgatactaataggcttgtggggatgtgtcagc
gggcaattcgtcagcagttacactgcagagaacagaacaggactatatggaagaaactat
gacagagaacgagcacgatactacaacgcccataatcggggtggttcgagggtgccccct
ggctattatagaagctcggatgcagattccataaatcctcaagaacatccaacgtacgaa
actagggaggaataccaaagaggagatcaagaccccatcgagtccgagaacatcaactca
tctcttaatggatatgaatcatccagaggtggatacgagtcatctgagagaagggaaacg
cctcaaagaggatatggagaatctggagatgtcgatacaagatatgattcatccagtagt
agttccactcttttttacaattccagggaaaatggaagggagtattctacaaattcacca
aatttgtcacagggttctgggcagtcatcgtatggctatgagtctagcggtggacaatct
ggatcagcatcattggatggccaatacggcggccaatctggatcatcatcaaacgatgaa
cagtctagatcatcatcatacggcggtcaatctggatcgccgtcatatcgcggtcaatcc
ggatcggcgtcatacaacggtcaatctggatcggggtcatacagcggtcaatctggatca
gctgcgtatagtggccagtctggatcatcgtcttacggtagtcaatctggtagtcaatca
gcctcatatggcagtcagtctggatcatatggaagtcaatcaggccaatcgtccggcccc
tatggctcatatgacagtagtccttatcaaaaccgcaggccctacgctagtagttatgat
atagtcgaagcacccggaagcgcttatggtataagaaatggtagcgataagtgcataccg
aaatgttttgctgaaaaaggaaatcgcggcttccctggtatacctggtatacccggagat
aagggacaccgtggttttcccggcgaggaaggtttagcgggggaaaaaggagcaaaaggg
gaacaaggcccgatgggaccgcgtggcccaaaaggtgaaagaggaagaaccggtgttccg
ggatttcctggtatcaacggcattcctggcattcaagggccatcggggcctcctggtata
ccaggcttggacggttgtaacggcactgatggtcttcctggaatcgatggtctgccagga
gaaccgggaccaagaggttaccctggtacatttggaattaagggacaaaagggagaagca
gcccactgcgaaagctatttgaaaggtcaaaagggagagcctggaagagatggagtcact
ggtccagctggtcatcctggacctcttggtccaccaggcccatctggtccgcaaggatcg
ccaggagatgtgggtccgcgaggcccacctggttctaaaggtctgaaagggtctatgggg
gtcggattttacggagcaaaaggtgagaaaggagtaccgggtcctcgaggagcaccgggg
gaaccggcgtgtggtgaaaaaaaaagcaatggtgggcatattggaccaaggggagaacag
ggaatgaaaggagacagaggtgaatttggattaccaggacaaaagggggaacctggaccc
gatggagattatggaatacctggtggtgtcggcatgaaaggagaaaagggtttaccagga
gcgcctggacctaggggaagagatggttttgctggaccacctggaccccccgggcaaaaa
ggggatagaggtctggaaggtcttccagggttagcaggaaggccaggtttaaaaggagaa
cctggtagagacggtcctccgggtttagtaggattgacaggccctcctgggccaccagga
ggtggaaaaggctttcctggggcgcctggtccgcaaggccctcgcggttatcctggacca
atgggaccaaaaggcatggatggtttcccaggagatcccggacccagaggtccagttgga
ccatcgggagggcctgggcttcccggaacacccggaccggaaggagttccgggagaaaaa
ggacagaagggagaatctggttcgataggattccctggaagtgatggagcaagaggtttt
cctggacccgttggccctcaaggcgcaccaggattaccaggagaaaaaggattatctata
atgggacctaaaggagaggatggggattcgggaagagatggagaaaagggtcaaaaagga
gaaaaaggcttttctggccctcgaggagcacctggagatgcattaaatggaatacctggt
tttactggaccatctggacctcagggagaaaagggtaacgctggtcgaccaggcatcccc
ggaagctcgggcagaccaggagaaaaaggagacattggtggtagatgcatcgactgcctc
cctggcgtaaaaggagataaaggtgatagaggattcgatggaagagacggagacattgga
ccaagaggaccccctggttccccaggatttaggggactttcaggtcaagacggggtacct
ggaagagacggaccaccaggcaaaccaggtcgcgatggaaatgacggtcttccgggatta
tcgggagccccaggaaaggatgcagtcatacctgagagtctaaaaagacctctgaagggt
gagccaggagcaaggggcgatgtagggccaccaggtccatcaggactcccaggaccaata
ggacccaaaggcgaaattggactaacaggtttaccaggacctaaaggggacaaaggttac
actggcttcccaggattggacggcaggtctggtgaaccaggtataccgggagcgaaaggt
gaaaagggaataagtattaaaggagacatcggagagatgggtttgaaaggagacaaaggg
gaagtaggagtatctgggtatccgggacgtaaaggtgaaccgggaagatgtccattagat
acaatatatcctccacagaaaggaagtaaaggattgaaaggtgacaagggtatagccgga
ttcccgggaagagatggtgaacctggtttcaaaggagacacaggtagccctggtttcccc
ggccctaaaggtgaattgggacctccaggaccagtaggaaaaagaggtctaccaggtcct
agaggggataagggagaagtcggtccaatgggtttcccaggtgaaccgggaagagacggt
gcttccggcctacctggattaagaggattgcaagggcagaaaggtgaagcgggtattcct
ggaataggacctccaggtcctccaggaccaatcggtataaagggagaaaaaggacttcca
ggattcccaggaaaaacaggacctcctggcaatgacggatttcctggaataatgggagag
aaaggagatattggaaattcaggccttaatggtttgactggccctccaggagaaaaggga
gagcctggtccacttggacctccgggaattgatggtatacctggaaggcctggaccagaa
ggtgctaaaggagaaccgggtctaaagggagaaattggaagatcaggattgccaggcttc
ccgggcccgaagggagaatatggtataccaggaggtcaaggacctaaaggattcaaaggc
agtctagggcgtcctggagcaccaggtgctcccggaatggatggaattccaggtctgatc
ggagaaaagggtgaaagaggctatccaggacctatagggccacaaggcttgatcggcatg
ccaggagaagtaggcttttcgggggaaaaaggggacattggtccatttggacctccagga
gtgccagggtcacccggtgtgccaggatttaagggagaagatggaatacctggtttacca
ggaagaaaaggagagccaggcgcagtgtctgagaaaggtcaaaagggagaaccagggatg
ccgggcttgcgtggacctgacggattgcctggtcaacgtggtttccaaggtctgaaagga
gattctgggcaaccaggaagaagcattgccggtattcctggagaaaagggcgatactggc
cctccaggactagatggtttacctggagttaacggaataaaaggagatagaggatttgat
ggcattcctggctctaaaggagacagaggtttccctggtgatcgcggcccaccaggtatt
gatggcatggatggattttcaggagaaaaaggagataaaggttatccgggagcgcccggc
ttctcaggtgaaaaaggagataaaggtttttccggtataaacggttatgatggaccaaaa
ggtgaaagaggttcaccaggaccggttggtcctgtaggtttccctggacctaagggcgat
tttggagaaagaggtccccctggtccattaattcagatgaagggtgaaaaaggggaacct
ggcccttctggtctaattggtagaacaggagagaaaggcgacacaggctatataggacaa
cctggactacctggagaaaagggagatataggacttccaggtattgcaggaagtcctgga
ctacctggtatacccggacccaaaggtgatgcgggataccctggagctgctggactgcca
ggtcttacagtgaaaggagaaaaaggtctccctggtttcccaggcaagaatggaagagaa
ggagctcccggtcttacgggtgaaaaaggtgaacgaggtttacagggattaccaggccaa
acgggaccttcaggacctcctggacctctgggcctacaaggacaaaaaggagatcgcgga
tttgatggtgtacctggaccagtaggtcccgttggtcctccagggctccctggaattgat
ggatctgagggcccccttggagaaaaaggcgataggggtcttcctggacttataggttca
cccggagaaaaaggagatcgaggtttaacaggagtggcgggaattcctgggttaccaggg
gaaaagggcgatagaggtttcgatgggcgtccaggactcccaggtcctataggaccttct
ggaattaaaggagatgaaggattgacaggaacgccaggactcccaggtgcgctaggaatg
aagggacaaaaaggagaaccagcaccaccaggttttccgggtccaaaaggagataggggt
tatcctggcgttgcaggtattccaggagaacgagggtcgccaggaattgacggcattccg
ggactacctggacaagttggtgaaaaaggagatcgaggatttgcgggaataccaggaagt
cccggcttggtaggagagaaaggggaccgtggttttgaaggagcgattggtcttcaggga
gctattggagaaattgggcaaaaaggagaacccggtattccttgcactaatgtaccagat
tatctgacaggcacactactggtacggcatagccaaagcagagaaataccacagtgcgaa
agtggtcacattagattgtgggagggtttctcccttctatatgtcgagggtaatgaaaaa
gctcacgctcaagatttaggtttcgccggctcttgcatcagaaaattctccaccatgcca
tttgtgttctgtgattacaacaacgtgtgccactacgccagtcgcaatgataagtcttat
tggctctcaactagcgcagctattccaatgatgccagtagccgaacatgaaatcgaggaa
tacatttcaagatgcgtggtgtgcgaggcgccggcaaacgtaatcgctgtccacagtcag
tcactaacattaccagattgtccttacggctggagctccctctggatcggttacagtttt
gtcatgcatacggctgccggagcagaaggtggcggtcagtcattgtccagcccaggttcc
tgtctggaagacttcagagcaacgcctttcatagagtgcaatggagctcagggtacttgc
cattacttcgccaataccctaagtttctggctggccacaatcgagacaaaccaacagttt
gagaaaccacagaagcaaaccctaaaagccggcaacgtcagaaataggatcagcagatgt
caagtctgcattaggaacacgtaa
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integrated database retrieval system
