Anoplophora glabripennis (Asian longhorned beetle): 108911564
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Entry
108911564 CDS
T07402
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
agb
Anoplophora glabripennis (Asian longhorned beetle)
Pathway
agb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108911564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agb03019
]
108911564
03041 Spliceosome [BR:
agb03041
]
108911564
Messenger RNA biogenesis [BR:
agb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108911564
Spliceosome [BR:
agb03041
]
Complex B
Other components
Prp19-related factors
108911564
Complex C
108911564
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
Suf
TPR_2
TPR_12
TPR_8
TPR_15
TPR_10
NRDE-2
PPR
RPN7
TPR_7
ARM_TT21
DHR-2_Lobe_A
TPR_1
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
108911564
NCBI-ProteinID:
XP_018572055
LinkDB
All DBs
Position
Unknown
AA seq
848 aa
AA seq
DB search
MQLKDENKKDSAEIIFADDDLPYEEEILRNPYSVKHWLRYIDHKKTAPRYGVNIIYERAL
KELPGSYKLWYNYLRIRRKQVKSRCITDPGYEEVNNAFERALVFMHKMPRIWMDYCTFLT
DQCKITRTRKVFDRALRALPVTQHYRIWPLYLKFVKKHNISETALRVFRRYLKLSPENAE
EYVDYLTETGKLDEAALVLAKIVNDENFISQHGKSKHQLWNELCELISKNPDEVRSLNVD
AIIRGGLRRYTDQLGHLWNSLANYYVRSGLFERARDIYEEAIQTVTTVRDFTQIFDAYAQ
FEELSLSKRMEEVANLTNPTEEDDTDLELRLARFEHLMERRLLLLNSVLLRQNPHNVQEW
HKRVQLYEGKPHEIINTYTEAVQTVDPKLAVGKLHTLWVEFAKFYENNGQIDDARLIFEK
ATHVPFVKVDDLATVWCEWAEMEIRNENYEEALKLMHKATVLPSRKVAYHDDSETVQARL
YKSLKVWSMYADLEESFGTFKSCKAVYDRIIDLKIATPQIIINYGVFLEENCYFEEAFQA
YEKGISLFKWPNVYDIWNTYLTKFLKRYGGSKLERARDLFEQCLENCPPQFAKHLYLLYA
KLEEEYGMARHAMAVYERATKAVPEQEMFEVFNIYIKRAAEIYGIPKTRQIYERAIEVLP
EDKTRDMCIRFADMETKLGEIDRARAIYAHCSQICDPRVTNEFWQIWKEFEVRHGNEDTM
REMLRIKRSVQAMYNTQVNMMSAQMLSSASSIAGTVADLAPGVKDGMRLLEAKAVEMAGT
SATTAKPGNIMFVRGETQGNAKDKVVNPDEIDIDEDDEDEEMEEDVPVEKQNIPSEVFGS
LKKQDEDD
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttaaagatgaaaataaaaaggactcagcagaaattattttcgctgatgatgat
ttgccttatgaagaggaaattttaagaaatccatattcagtgaaacactggctaagatat
attgatcataagaaaacagcacctaggtatggggttaatataatatatgaacgagcttta
aaagaattaccgggttcttataaactctggtataattatttacgtatacgaagaaaacaa
gtgaaaagccgctgtattacagatcctgggtatgaagaagttaataatgcatttgaacgt
gccttagtatttatgcacaagatgccaagaatatggatggattattgtacatttttaact
gaccagtgcaaaattacaagaaccagaaaagtatttgaccgtgctttaagagcattacct
gtaacacagcattatagaatttggccgttatatttaaaatttgttaagaagcataatata
tctgaaactgctctaagagtttttcgtagatatttaaaactatcccctgaaaatgctgaa
gaatatgttgattacttaactgaaactggaaaacttgatgaagctgcattagtattggca
aagattgtcaatgatgaaaattttatttcacaacatggaaaatctaaacatcaattatgg
aatgagctgtgtgaacttatctctaaaaaccctgacgaagttcgatcattaaatgtagac
gctattattagaggaggtttgagacgttatacagatcaattagggcatttgtggaattcg
ctcgcgaattattatgtccgcagtggtttatttgaaagggcaagggatatatatgaagaa
gctattcaaaccgttaccacagttcgagatttcactcagatatttgatgcatacgcacaa
tttgaggaactaagtttaagtaaaagaatggaagaagttgccaatttaaccaatcctacc
gaagaggatgatactgacttagaattaaggttggcacgttttgagcatttaatggaaaga
agattgctacttttaaattctgttttgcttaggcagaacccccataatgtacaagaatgg
cataaaagggtacaactctatgaaggtaaacctcatgaaattattaatacttatactgaa
gccgttcagactgttgatccaaaattagctgttgggaaactgcatactctttgggtggaa
tttgcaaaattttatgaaaataatggacaaatcgacgatgcaagattaatttttgaaaaa
gcaactcatgttccttttgtaaaggttgatgatctagctactgtttggtgtgaatgggca
gaaatggaaattagaaatgaaaattatgaggaagctctaaaattaatgcataaggccact
gttttaccttcccgtaaagtagcctatcatgacgacagtgagactgttcaagcaaggctg
tacaagtcacttaaggtttggtctatgtatgctgacttagaagaaagctttggtactttt
aaatcgtgtaaagctgtctatgataggattatcgatctcaaaatagctacgcctcagatt
ataataaactatggagtatttcttgaagaaaactgttattttgaagaggctttccaagca
tatgaaaagggtatttccttatttaaatggccaaatgtttatgatatatggaacacatat
ctaacaaaattcttaaaacgctacggaggaagtaaattagaaagagctagagatttattt
gaacagtgtcttgaaaattgtcctcctcagtttgctaaacatttatacttgttatatgct
aaattggaagaagaatatggaatggctaggcatgctatggctgtttatgagagagcaaca
aaggctgtacctgaacaagaaatgtttgaagtattcaatatatacattaaacgagctgcc
gaaatttatgggatccccaaaaccagacagatttatgaaagggcaattgaagtattacca
gaagataaaaccagagatatgtgcatacggtttgctgatatggaaactaaactaggggaa
attgaccgagctagagctatttacgcacattgcagccaaatctgcgatcctagagttaca
aatgaattttggcaaatttggaaagaatttgaagttaggcacggaaatgaagacacgatg
cgggaaatgttgaggataaaacgtagtgtgcaggctatgtataatacacaggttaatatg
atgtcagctcaaatgctgagttcggcaagttctatagcaggaactgtggcagacttggca
ccaggcgttaaggacggtatgcgattattagaagcgaaagcagtagaaatggcaggtaca
tctgcaacgactgccaagccgggaaatataatgtttgtcaggggcgagactcaaggaaat
gctaaagataaggtagtgaatcctgatgaaatagatattgatgaagatgacgaagatgaa
gagatggaagaggatgtgccagtagaaaaacaaaatattccatcagaggtgtttggaagt
ctgaaaaagcaagatgaagatgactga
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