Anoplophora glabripennis (Asian longhorned beetle): 108912150
Help
Entry
108912150 CDS
T07402
Name
(RefSeq) tRNA-splicing ligase RtcB homolog
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
agb
Anoplophora glabripennis (Asian longhorned beetle)
Brite
KEGG Orthology (KO) [BR:
agb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
agb03016
]
108912150
Enzymes [BR:
agb01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
108912150
Transfer RNA biogenesis [BR:
agb03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
108912150
Prokaryotic type
tRNA splicing ligases
108912150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-GeneID:
108912150
NCBI-ProteinID:
XP_018572837
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MVVRQYQEELQYLEKLSPYCWRIKKGFQPNMKVEGVFYVNQRLEKLMLDELRNACRPGMV
GGFLPGVKQIANVAALPGIVGRSVGLPDVHSGYGFAIGNMAAFDINNPDSIVSPGGVGFD
INCGVRLLRTNLFEQDVLPIKEQLAQSLFDHIPVGVGSKGIIPMNAKDLEEALEMGMDWS
LREGYIWAEDKEHCEEYGRMLNADPAKVSMRAKKRGLPQLGTLGAGNHYAEIQVVEEIYD
KWAACKMGIEEIGQVCVMIHSGSRGFGHQVATDALVQMEKAMKRDNIETNDRQLACARIN
SVEGQDYLKSMAAAANFAWVNRSSMTFLSRQAFAKQFHMSPDDLDMHVIYDVSHNIAKVE
EHIVDGKPTTLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLIGGTMGTCSYVLTGTEQGM
LETFGSTCHGAGRALSRAKSRRNLDYTDVLRKLEYMGISIRVASPKLVMEEAPESYKNVT
DVVDTCHAAGISKKCIKLRPIAVIKG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggttgtgcgtcaatatcaagaagaacttcagtatctagaaaaattatccccatactgc
tggagaataaaaaagggctttcaacccaacatgaaagtggaaggtgttttttacgtgaac
caaaggttagaaaaattgatgttggatgaactaagaaatgcctgtagacctggcatggtt
ggtggctttcttccaggtgtcaaacaaatagcaaatgtagctgccttaccaggtatcgtt
ggtagatctgtaggtttaccagatgttcattcaggatatggctttgccattggaaatatg
gcagcattcgacattaacaatccagattctattgtatcaccaggaggtgtgggttttgat
attaactgtggagtgagactgttgagaaccaatctttttgaacaagacgttttgccgatt
aaagaacagctagcacaaagtttatttgatcatattccagttggggtaggatcaaaagga
atcattccaatgaatgcaaaagacttagaagaagctttggaaatgggtatggactggtca
cttcgagagggttacatttgggcagaagataaagagcactgtgaagaatatggtagaatg
ctaaatgcagatccagcaaaagttagcatgagagcaaagaaaagaggattacctcagtta
ggaacattgggagccgggaatcattatgctgaaattcaagtagtggaggagatttacgat
aagtgggctgcttgtaagatgggtatcgaagaaataggacaggtatgtgtaatgatccat
tcaggaagtagaggattcggtcatcaagtggctacagatgctttagtccaaatggaaaag
gctatgaaacgagacaacattgaaacaaacgacaggcaattagcttgtgccagaattaat
tctgtcgaaggacaggactatttaaaatctatggcagctgctgcgaactttgcttgggtg
aacagaagctcgatgacgtttttaagtagacaagcctttgccaaacaatttcatatgtca
ccagacgacctagacatgcacgtgatatatgacgtttcccacaacatagccaaagtcgaa
gaacatatcgtagatggtaaaccaacaaccctcttagttcatagaaagggatcgactagg
gcatttcccccacaccatccccttattcctgtggattatcaacttacgggacagcctgtc
ttaattggcggtacaatggggacttgtagttatgttttaacgggaacggaacagggtatg
ctggaaacattcggatctacttgtcacggagccggcagggccctatccagagccaagtct
aggcgcaatttagattatacggatgttttaaggaaattagaatacatgggaatttcgata
cgtgtagcgtcacctaaattagtaatggaggaggcaccagaatcttacaaaaatgttact
gatgtagttgatacgtgtcatgctgctggaatttctaagaaatgtattaaactgcgtcct
attgccgttataaaaggataa
DBGET
integrated database retrieval system
