Anoplophora glabripennis (Asian longhorned beetle): 108914082
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Entry
108914082 CDS
T07402
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
agb
Anoplophora glabripennis (Asian longhorned beetle)
Pathway
agb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108914082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
agb03041
]
108914082
03009 Ribosome biogenesis [BR:
agb03009
]
108914082
Enzymes [BR:
agb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108914082
Spliceosome [BR:
agb03041
]
Complex A
U2 snRNP components
U2 related factors
108914082
Complex B
108914082
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
108914082
Ribosome biogenesis [BR:
agb03009
]
Eukaryotic type
90S particles
Helicases
108914082
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_19
AAA_22
nSTAND3
SRP54
ResIII
Flavi_DEAD
AAA_25
ABC_tran
ATPase
T2SSE
TsaE
Motif
Other DBs
NCBI-GeneID:
108914082
NCBI-ProteinID:
XP_018575304
LinkDB
All DBs
Position
Unknown
AA seq
715 aa
AA seq
DB search
MSKRRIEVLDPFIKKKREERGISTAVTSNQVSVGSINPYTGLPYTQKYHELFRKRIGLPV
FEYRADFMRLLAEHQCIVLVGETGSGKTTQIPQWCVEYSRTVGTKGVCCTQPRRVAAMSV
AQRVSEEMDVALGQEVGYSIRFEDCSSAKTILKYMTDGMLLREGMSDPMLDAYQCILLDE
AHERTLATDILMGVLKEVIKQRKDLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVEI
FYTPEPERDYLEAAIRTVIQIHMCEEIAGDILLFLTGQEEIEVACKRIKRDIDNLGPEVG
ELKCIPLYSTLPPNLQQRIFEDPPPNKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGF
AKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTKPGKCFRLYTEKAYKNEMQDNTYPE
ILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALDDDGNLTDLGAV
MAEFPLDPQLAKMLIASCNHNCSNEILSVTAMLSVPQCFVRPNEAKKAADDAKMRFAHID
GDHLTLLNVYHAFKQSMEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRTSTDFT
SKDYYINIRKALVNGFFMQVAHLERTGHYLTIKDNQIVQLHPSTCLDHKPEWVIYNEFVL
TTKNYIRTVTDIKPDWLLKIAPQYYDLNNFPQCEAKRQLEILQNRLESRQYQQGF
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaagaagaatcgaagtgttagatccttttataaaaaagaaaagggaagaacgt
ggaataagcacagctgttactagtaatcaagtatcagtaggatctattaatccatatact
ggattaccgtatactcagaaatatcatgagttattccgaaagaggataggtttaccggta
tttgagtatcgtgctgactttatgcgattacttgctgaacatcagtgcatagtgcttgtt
ggtgaaacaggatctgggaaaacaacacaaattccacagtggtgtgtagaatattcaaga
actgttggaacaaaaggggtttgctgtactcaaccaagaagagttgcagccatgtctgta
gctcaaagagtatcagaagaaatggatgttgcacttggacaagaagttggttacagcatt
cgttttgaagattgctcttcagctaaaacaattcttaaatatatgactgacggtatgctg
ctcagagagggaatgagtgatcccatgttagatgcataccaatgcatattactagatgaa
gctcatgaacgaactttagctactgacattctaatgggtgttttaaaggaggttataaaa
cagcgcaaagatttaaaattagttatcatgagtgcaactttggatgcaggtaaatttcag
cagtattttgataatgctccattaatgaatgtacctggacgaacccatcctgtggaaata
ttttacacgcccgaacctgagagggattatttagaagccgctataagaacagtaattcaa
atacacatgtgtgaagaaatagcaggagacatcttgttatttttaactggtcaagaggaa
atagaagtggcctgcaaaaggataaaaagggatattgataacttgggtccagaagtgggg
gaactaaaatgcattccactgtattcaacacttcctcctaatcttcagcagcgtattttt
gaggatcctccaccaaacaaacctaatggtgccattggacgcaaagttgttgtttctaca
aatattgcagaaacttctctcactatagatggcgtagtttttgttattgatcctggattt
gcaaaacaaaaggtgtacaatcctagaattagggtagaatctctcttggtatccccaatt
agtaaagcatctgcccaacaaagagctggtcgtgccggcagaactaaaccaggaaaatgt
tttcgtttatatacagaaaaggcatacaaaaatgaaatgcaggacaacacatacccggaa
attttaagatctaatttgggatcggtagttctgcagttgaaaaagttaggcattgatgat
ttagtgcacttcgatttcatggatccccctgcacctgaaactctaatgagagccttagag
ttgctcaattatttggccgctttggacgacgatggcaatctcacagatctgggagcagta
atggcagagttccccttggatccacaattggcgaagatgctgattgctagttgcaaccac
aactgttcaaatgaaatattgtcagtaacggcaatgttgtcagtcccacagtgtttcgtc
agaccgaatgaagcaaagaaggccgccgatgacgccaagatgcgcttcgcccatatcgat
ggggatcatctcaccctccttaatgtctaccacgcctttaaacaaagtatggaagatcca
caatggtgttatgacaattttgtcaattaccgttccttaaagtcagcagacaacgtcaga
cagcagctttcaagaattatggacagattcaacctgaagagaacttcaacagattttaca
agcaaagattattatattaacatacgaaaggcattagtgaatggattttttatgcaggta
gcccatttagaacgtacaggacattatcttacaattaaggacaaccaaattgtacaacta
catccgtcaacttgtttagatcataaaccagaatgggttatttataacgagtttgtattg
acaacaaaaaattatattaggacagttacagatatcaaacctgattggcttttaaaaata
gcaccacagtattacgatctgaacaatttcccgcagtgtgaagcaaagcgtcagttagaa
atcctccagaacagattagaatccaggcagtatcaacaaggattttaa
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