Anoplophora glabripennis (Asian longhorned beetle): 108914247
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Entry
108914247 CDS
T07402
Name
(RefSeq) superkiller viralicidic activity 2-like 2
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
agb
Anoplophora glabripennis (Asian longhorned beetle)
Pathway
agb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108914247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agb03019
]
108914247
03041 Spliceosome [BR:
agb03041
]
108914247
03009 Ribosome biogenesis [BR:
agb03009
]
108914247
03016 Transfer RNA biogenesis [BR:
agb03016
]
108914247
Enzymes [BR:
agb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108914247
Messenger RNA biogenesis [BR:
agb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
108914247
Spliceosome [BR:
agb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
108914247
Complex C
U4/U6.U5 tri-SnRNP related factors
108914247
Ribosome biogenesis [BR:
agb03009
]
Eukaryotic type
Pre-60S particles
Helicases
108914247
Transfer RNA biogenesis [BR:
agb03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
108914247
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
MTR4_beta-barrel
DEAD
MTR4-like_stalk
DEXQc_Suv3
Helicase_C
ResIII
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
108914247
NCBI-ProteinID:
XP_018575535
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MAESIDDLFDCFEDADEEENAAKGEDSSEQEQVTERVSEVCIKGDKRKNEGDEEFVAKRS
KADDVDVACINFEELKNRIVVHSIDTLDSCTHEVACPPGYNYAPLQPPRGDPVKKYPFAL
DPFQKESILCVDNNQSVLVSAHTSAGKTVIAEYAVATSLKNKQRVIYTTPIKALSNQKYR
EFLDEFKDVGLVTGDVTINPSASCLIMTTEILRNMLYRGSEIMREVGWVIFDEIHYMRDK
ERGVVWEETLILLPHNVHFVFLSATIPNARQFAEWVAHLHHQPCHVVYTDYRPTPLQHFI
YPAGGSGIHMVVDESGTFKDDSFNAAMAVLQNSGDAAKGDQKGRRGGMANKDPTQTDIFK
VVKMVMERNFAPVIVFSFSKKDCEVYAMQMTKLDFNTTAEKQLVDEVFNNAMDVLSDDDR
HLPQVENLLPLLRRGIGIHHGGLLPILKETIEILFGEGLIKALFATETFAMGLNMPARTV
LFTGMRKFDGQEYRWITSGEYIQMSGRAGRRGIDDRGIVILMVDEKVPPAAGRNIVKGLP
DPINSAFHLTYNMVLNLLRVEEINPEYMLERSFYQFQNQTAIPGLYEDFQQKLEKFNSFD
VKCEDQIAPYYNIRQELDSLGVQFRTYLTKSEYLIPFLQPGRLLKIKTQDAEYDWGAVVN
FKKVQEILPGRKGRQGQSKAVTKVQVDLLLHVISENDAEDGIPKPCLDDQKGEVEIVSVD
SSLITHVSSVRLYCPNDLRSKDSRKGMYKAVKEVKKRFPEGPPLLNPVDDMKITNPEFLD
IVKKIEILEKKMYEHPMHKNALLETEYTKYEEKVVCKEELRVARQKLLEAKSVLQLDELR
CRKRILRRLGYCTSTDVIQLKGRVACELSSADELLITEMIFNGVFGNLTPPQACSLLSCF
VCDEKGQETPKLSEELSGPLRQMQDLARRIAKVSTEARLPLEEDAYVERFKPFLMDVVFS
WCNGSSFKDLCGMTDIFEGSIVRCMRRLEELLRQMVQASKTIGNTELEDKFNNAIKMIKR
DIVFSSSLYL
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggcagagtcaatcgatgacttatttgattgttttgaagatgcggacgaagaagaaaat
gcagcaaaaggggaggattcctcggaacaggagcaggtaactgagagggtttcggaggtt
tgcattaagggtgacaagcgaaagaacgagggtgacgaagaattcgttgctaaacgtagc
aaagccgacgatgtagacgtagcgtgtattaacttcgaggagttaaaaaaccgtatagtc
gtgcacagtatagacacacttgattcttgtacacacgaagtagcttgtccaccgggttat
aattatgctccactgcaaccacctaggggtgaccctgttaaaaagtacccatttgcattg
gatccctttcagaaagaatccatattgtgtgttgacaacaatcaatctgtcttggtgtct
gctcatacatctgcaggaaaaacagtaatagcagaatatgcagtagcaacatctttaaaa
aacaagcagagagttatatacacaacgccgataaaggcgttgtcaaatcagaaatataga
gagtttctcgatgaatttaaagatgttggtctagttactggggacgtaacaataaatcca
agtgcatcgtgtctcattatgacgacagagatcttgcgtaatatgttgtacagaggttcg
gaaataatgagggaagtggggtgggtaattttcgacgagattcattacatgcgtgacaaa
gaacgaggggtggtttgggaggaaactttaattctacttcctcacaatgtacatttcgtt
ttcctgtccgctaccataccgaacgctaggcaatttgccgaatgggtggcgcatctgcat
caccaaccgtgtcatgtcgtgtacacggattatcggcccacacctttgcagcattttatt
tatccggcaggcgggagcgggattcatatggttgtagatgaatcgggtacgtttaaagac
gacagtttcaacgccgcaatggccgtgttgcaaaattctggagatgccgccaagggcgac
cagaagggtaggcgcgggggtatggccaataaagatcccacgcagacagatatttttaaa
gttgtgaaaatggtcatggaaaggaactttgctcctgtgatcgttttcagctttagtaaa
aaagattgcgaagtttatgctatgcaaatgacgaaattggattttaacacaactgccgaa
aaacagttggtcgacgaggttttcaacaacgccatggacgttttgtcggacgacgacaga
cacttgcctcaggtcgaaaacttgttgcctctcctcaggcgaggtataggtatacatcac
ggaggtttgttgccgatattgaaggaaactatcgaaatacttttcggtgaggggcttatt
aaagccttgtttgcaacagaaaccttcgcgatgggtctgaatatgccggcgagaacggtt
ctgttcaccggtatgaggaagtttgacggacaggagtatcgatggatcacctctggagag
tatatccaaatgtcgggtagggcgggtaggaggggtatcgacgacaggggtatagttatc
ttgatggtagacgagaaggtcccgcccgctgcgggacggaacatagttaaaggtttaccg
gatccgatcaattcggcgtttcatttaacctacaatatggtccttaatttgctgcgggtg
gaagagataaacccggaatacatgttagaaaggtctttctatcagttccagaatcaaacc
gctatacccggactttacgaagattttcagcagaaactagaaaagttcaactcgtttgat
gttaaatgcgaggatcaaatagccccttactacaacatcagacaagaactggactcattg
ggagtccagtttagaacatatttaaccaaatccgagtaccttattccctttctacaaccc
ggtagattactgaaaatcaaaacgcaggacgctgaatacgactggggggcagtggtgaac
ttcaaaaaagtccaagagatcctacctgggaggaaaggcagacagggacaatccaaggca
gtgacaaaagttcaggtggaccttttattacacgtcatatccgagaatgatgcagaggac
ggtattcctaagccctgtctggatgaccagaaaggagaagttgaaatcgtcagcgtcgac
tcgtccctcatcacgcacgtttcctcagtcagactgtactgtccgaacgacctgaggtcc
aaagacagtagaaagggcatgtacaaagcggtaaaagaggtcaagaaacgtttcccggag
ggtccgccgctgctaaatcccgtcgacgacatgaaaataacgaacccggaattcctcgat
atcgtgaagaagattgaaattttggaaaagaagatgtacgaacacccgatgcacaaaaac
gcccttttggaaaccgaatatactaaatacgaggagaaagtcgtatgcaaggaagaactg
agggtggcgagacagaaattattggaagcgaaatccgtccttcagctggacgagttgagg
tgcaggaagaggatactgaggaggctggggtattgtacgagcaccgacgttatacagctc
aagggcagggtggcttgcgaactgagcagcgccgacgaactgctgatcacggagatgata
tttaatggggtgtttggcaatttgacgcctccacaagcgtgctccttactgagttgtttc
gtgtgcgacgagaagggccaggaaacgccaaagttgtccgaagagctgtcggggcccttg
aggcagatgcaggacttggcgagaaggatagccaaggtgagcaccgaggctcgcctgccg
ctagaagaagacgcctacgtcgaaaggtttaagccgttcttgatggacgtagtatttagt
tggtgtaacggtagttcattcaaagacctctgtggcatgacggacatattcgagggttcg
atagttcggtgtatgaggcggctggaggagctgctgcgtcagatggtgcaggcctcgaaa
actatcgggaataccgagttagaggataaatttaataacgccatcaaaatgattaagagg
gacattgtcttctcgtctagtctttatttgtaa
DBGET
integrated database retrieval system
