Anoplophora glabripennis (Asian longhorned beetle): 108916542
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Entry
108916542 CDS
T07402
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
agb
Anoplophora glabripennis (Asian longhorned beetle)
Pathway
agb03020
RNA polymerase
agb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
agb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108916542
09124 Replication and repair
03420 Nucleotide excision repair
108916542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agb03021
]
108916542
03400 DNA repair and recombination proteins [BR:
agb03400
]
108916542
Enzymes [BR:
agb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108916542
Transcription machinery [BR:
agb03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
108916542
DNA repair and recombination proteins [BR:
agb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
108916542
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
DUF3137
Motif
Other DBs
NCBI-GeneID:
108916542
NCBI-ProteinID:
XP_023312604
LinkDB
All DBs
Position
Unknown
AA seq
1222 aa
AA seq
DB search
HSIGIGDTIADPQTYLEIQKAIKKAKEDVIEVIQKAHNMELEPTPGNTLRQTFENQVNRI
LNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACVGQQNVEGKRIPFGFRK
RTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLIDTAVKTAETGYIQRRL
IKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLCGEMVEFQTLPTVKLSNKAFERKFKFDP
SNEKYLRRVFNEEVIKQLMGSGEVISELEREWEQLQKDREALRQIFPSGESKVVLPCNLQ
RMIWNVQKIFHINKRAPTDLSPLRVIQGVRELLKKCIIVAGEDRLSKQANENATLLFQCL
VRSTLCTKCVSEEFRLSTEAFEWLIGEIETRFQQAQANPGEMVGALAAQSLGEPATQMTL
NTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGAAARDAEKAKNVLCRLEHT
TLRKVTANTAIYYDPDPQNTVIPEDQEFVNVYYEMPDFDPTRISPWLLRIELDRKRMTDK
KLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDDGKFGEGADEDVDKMDDDM
FLRCIEANMLSDMTLQGIEAISKVYMHLPQTDSKKRIVITETGEFKAIAEWLLETDGTSM
MKVLSERDVDPVRTFSNDICEIFSVLGIEAVRKSVEKEMNAVLQFYGLYVNYRHLALLCD
VMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLMDAASHAEVDPMRGVSENIILGQL
PRMGTGCFDLLLDAEKCKMGIPIPQAHGGDMTSGMFFGSAATPSSMSPGGAMTPWNQGAT
PYVGSAWSPQNLMGSGMTPGGPAFSPSAASDASGMSPAYGAWSPTPQSPAMSPYISSPHG
QSPSYSPSSPAFQPTSPSMTPVSPGYSPSSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPS
YSPTSPSYSPTSPSYSPTSPSYSPTCPSYCPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPASPSYSPTSPSY
SPSSPQYSPASPSYSPSSPKYSPTSPSYSPTSPSFAGGSPQYSPTSPSYSPTSPSYSPSS
PQHTPAASSRYSPSSPNYSPSSPSYSPTSPQYSPHSTKYSPTSPTYTPTSPSYSPASPAY
SPQPPRYSPSSPSYSPTNQDQD
NT seq
3671 nt
NT seq
+upstream
nt +downstream
nt
gtcatagtattggtatcggtgacacaattgccgatcctcagacgtacttggaaattcaaa
aagccattaaaaaagccaaggaggatgtaatagaagtcatccagaaagcgcacaacatgg
agttggagcctaccccgggtaataccctacgtcagacgttcgagaaccaagtaaacagga
ttctgaatgatgctcgtgacaaaaccggcggttctgccaagaaatccttgacggaataca
ataacttaaaggctatggtggtatcgggatccaaaggatctaacattaacatttctcagg
ttatcgcttgtgtggggcaacagaacgtagagggtaaacgtatcccgttcggcttcagga
aacgtaccttgccgcacttcatcaaagacgattacggtcccgaatctaggggattcgtag
aaaattcgtatcttgcaggactgaccccgtcagagttctatttccacgccatgggaggtc
gtgagggtctcatcgataccgccgtaaaaaccgccgaaaccggttacatccagcgtcgtc
tgataaaggctatggagtccgtgatggtgcactacgacggcaccgtcagaaattcggtcg
ggcagctcatccagttgcgttacggggaggacgggttgtgcggtgagatggtagaatttc
aaacgctaccgaccgtgaaattgagcaacaaggcgttcgagaggaagttcaaattcgacc
cgagcaacgagaagtacctccgcagggttttcaatgaggaagtcattaaacaactcatgg
gatcgggcgaggtgatatccgaactggaacgggagtgggagcaactgcaaaaggaccgcg
aggctctcagacagatcttcccgagcggcgaatcgaaagtcgtacttccctgcaacctac
aacgcatgatttggaacgtacagaaaatcttccacatcaacaagcgggcccccaccgacc
tctcccccttgagagtcatacagggtgtgagagagctcctgaaaaaatgcataatagtgg
cgggagaagatcgtctctctaagcaagccaatgaaaacgccacgctcctcttccagtgtc
tcgtgaggtccaccctgtgcacgaaatgcgtatcggaggagttcaggctcagcacggagg
ctttcgagtggttgatcggtgaaatcgagacgcgattccaacaggcccaggccaaccccg
gagaaatggtcggcgccctcgccgcccagtccctcggcgaacccgccactcagatgaccc
tgaacactttccatttcgctggtgtatcttcgaagaacgtaaccctcggcgtgccccgac
tcaaggaaatcatcaacatctccaagaaaccgaaagctccgtctcttacggtattcctaa
cgggcgctgccgctagggacgcagagaaagccaagaacgtcctctgccgattggaacaca
ccaccctgaggaaggtcaccgccaacaccgccatttactacgatcccgacccgcaaaaca
ccgtcatccccgaggaccaggagttcgtcaacgtgtactacgagatgcccgatttcgacc
cgaccaggatatcgccctggttgctgcgtatcgaactcgacaggaaacgtatgacagaca
agaaactcaccatggaacagatcgcggagaagataaacgccggtttcggcgacgatctca
actgtatcttcaacgacgacaacgccgagaagttggtgttgcgtatacggataatgaaca
gcgacgacgggaagttcggggagggggcggacgaggacgtggataagatggacgacgaca
tgttcctcaggtgtatcgaggccaacatgctcagcgacatgacgttgcagggtatcgagg
ccatttccaaggtgtacatgcacctgccccagacggactcgaagaaacgcatcgttatta
ccgaaacgggagaattcaaagcgatagcggaatggttgctggaaactgacgggacgagta
tgatgaaggtgttgtccgagagggacgtcgatccggtcagaaccttttccaatgacattt
gtgagatattttcggtgcttggaatcgaagccgtccgtaaatcggtggaaaaagagatga
acgccgtactgcagttctatggcctttacgtaaactaccgacatctggccttactttgcg
acgtgatgacggcgaaaggtcatctcatggccattacccgtcacggcataaacagacagg
ataccggagccttgatgaggtgttccttcgaggaaaccgtcgatgtactgatggacgccg
cctcgcacgccgaggtagacccgatgaggggcgtctccgagaacattatcctcggtcagt
tgcctcggatgggtaccggctgtttcgatctgttgctggatgccgagaagtgtaaaatgg
gcattcctattccacaagcgcatggcggcgatatgacttcggggatgttcttcggttcgg
ccgctacgcctagcagtatgagccccggtggggccatgactccatggaatcaaggggcta
ctccatatgttggaagtgcttggtcgccacaaaatctaatgggaagcggcatgacccccg
gtggtccggcattctcgccttctgccgcttcggacgcatcaggaatgtcgccagcttacg
gagcatggtccccgacacctcagtccccggccatgtctccttatatatcgtcaccacacg
gtcaatcaccgtcatacagtccttccagtccagctttccaacccacatccccatccatga
cacccgtttctccgggttattccccgagttcccccggatattccccaaccagcccgaatt
acagcccaacgagccccagttattcacctaccagtcctagttactctccaacttctcctt
catattctccgacaagtcctagttattctccgacgagtcctagttattctccaacttccc
cgagttattctcctacttgtcccagttactgtccgacttctccgagttactcccctactt
ctccaagctacagtcctacttctcccagttactctccaacttctccttcttacagcccaa
cctcgccaagttattcccctacgtctccttcatacagtccaacttctccgagttattctc
caacttctccaagttacagtcctacttctccaagttattctccaacttcgcctagttatt
ctccttcttctccgagatacaccccggcatcgcccagttattcgccaacgtctccatctt
attccccatcttctcctcagtattccccagcttctccgagttattctccgtcttctccaa
aatattcccctacttcgccgagttactcacctacttcaccgtcgtttgccggtggaagtc
ctcaatattctccgacttctccgagctattcgcctacttctcccagttattctccatcga
gtcctcagcacacgccagcggcaagttctagatattccccatcttctcccaactattcgc
ccagctctcccagttattcgcccacttctcctcaatattctcctcacagtacaaagtatt
ctcccacttctcctacttatacacctacaagtcctagttactcgccggcgtctcccgcgt
attcgcctcagccacctagatattcaccttcgtcacctagttactcgcccacaaaccagg
atcaggattga
DBGET
integrated database retrieval system
