Agrobacterium sp. RAC06: BSY240_1302
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Entry
BSY240_1302 CDS
T04501
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
agc
Agrobacterium sp. RAC06
Pathway
agc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
agc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BSY240_1302 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agc03021
]
BSY240_1302 (rpoZ)
03400 DNA repair and recombination proteins [BR:
agc03400
]
BSY240_1302 (rpoZ)
Enzymes [BR:
agc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BSY240_1302 (rpoZ)
Transcription machinery [BR:
agc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BSY240_1302 (rpoZ)
DNA repair and recombination proteins [BR:
agc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BSY240_1302 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
MinE
Motif
Other DBs
NCBI-ProteinID:
AOG08216
UniProt:
A0AAI8D0K9
LinkDB
All DBs
Position
complement(1330842..1331243)
Genome browser
AA seq
133 aa
AA seq
DB search
MARVTVEDCIDKVENRFELVLLASHRARQISQGAPITIDRDKDKNPVVALREIADETLSP
DDLKEDLIHSLQKHVEVDEPEQEPSSMLANTGTAGKGEEEDELPETLTFDQMSEEELLAG
IEGLVPPEKSDDY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgtcaccgttgaagattgcatcgacaaagtcgagaaccgcttcgagctcgtt
ctgctcgcaagccaccgtgcccgccagatctcccagggcgcgccgatcaccatcgatcgc
gacaaggacaagaacccggtcgtcgctctgcgtgaaatcgctgacgagaccctctcgccc
gacgacctgaaggaagatctgatccattcgctgcagaagcacgtcgaagtcgacgagccg
gaacaggagccgagctcgatgctggccaataccggcaccgccggcaagggcgaggaagag
gacgaactgccggaaacgctcaccttcgaccagatgtcggaagaagagctgcttgccggt
atcgaaggccttgttccgccggaaaagagcgacgattactaa
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