Agrobacterium sp. RAC06: BSY240_1462
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Entry
BSY240_1462 CDS
T04501
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
agc
Agrobacterium sp. RAC06
Pathway
agc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSY240_1462 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agc03019
]
BSY240_1462 (recQ)
03400 DNA repair and recombination proteins [BR:
agc03400
]
BSY240_1462 (recQ)
Enzymes [BR:
agc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BSY240_1462 (recQ)
Messenger RNA biogenesis [BR:
agc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BSY240_1462 (recQ)
DNA repair and recombination proteins [BR:
agc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BSY240_1462 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AOG11710
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All DBs
Position
1479555..1481411
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AA seq
618 aa
AA seq
DB search
MPTHSLTDPLFSAQAEEGPLSVLKRVYGYSAFRGRQAEVVSQVVSGGDAVVLFPTGAGKS
LCFQVPALCRPGVGVVVSPLIALMRDQVEALKGLGVKAAALNSTLSREEYVEIRRALDRG
ELDFLYVTPERTATPGFIEMMQGVEIALFAIDEAHCVSQWGHDFRPEYRELGKLADLFPG
VPRLALTATADPHTREDIIARLRLEEAEVFTTSFDRPNIAYEIVERDQPRQQLLRFLSRH
KGSSGIVYCLSRAKVEETASWLDDQGIRALPYHAGMDRAIRDANQDAFLKEEDLCLVATV
AFGMGIDKPNVRYVAHLDLPGSVEAYYQETGRAGRDGLPSEVWMAYGMADVIQRGRMIDE
GGAADDIKRVERAKLNALLAICETPGCRRQAILKHFGESHAGGCGNCDTCLKPVETWDGS
EAAIKALAAIYRTGERFGTGHLIDVLMGNENDKTMRFGHTDMPVFGAGKDLSAKTWQSVY
RQLLAAGYIRVDHTAFGALTLEESARAVFKREVDVRFRKDRPTTGKAARGQSSRTAQAKA
GLDQADQELFEALRAKRMELAKEQGVPPYVIFPDTTLVALATERPMDEDEMLSISGIGQS
KLERYGDAFLEVITAYSR
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgccgactcactcccttaccgatccgctcttttccgcccaggctgaggaaggcccgctt
tccgttctgaagcgcgtctatggctattccgctttccgcgggcgccaggccgaagtggtc
agccaggtagtgtccggcggcgatgccgtggtgctgtttccgacgggggctggcaaatcg
ctctgtttccaggtgcccgcactctgccggccgggcgtcggcgttgtcgtgtcgccgctg
attgccctgatgcgcgatcaggtggaggccttgaaaggcctcggcgtcaaggcggcggct
ctcaactcgacgctgagccgcgaggagtatgtcgagatccgccgggcgctcgatcgcggc
gagctcgactttctctatgtgacgccggagcggaccgcgaccccaggcttcatcgagatg
atgcaaggcgtggaaatcgcgctctttgccatcgacgaggcccattgcgtttcgcaatgg
gggcatgatttccgacctgaatatcgcgaactcggcaagcttgccgatctctttccgggc
gtgccgcgactggcgctgaccgccaccgccgatccgcatacgcgcgaagacatcattgcc
cgactgcggttggaagaggcagaagtctttaccacctccttcgacaggccgaacatcgcc
tatgagatcgtcgagcgtgatcagccgcgccagcagctgctccgttttctctcgcgccac
aagggatcgagcggcatcgtctattgcctgtcgcgcgccaaggtcgaggagactgccagc
tggctcgacgaccaggggatccgggcactgccctatcacgccggcatggaccgggcgatc
cgagacgccaatcaggatgccttcctgaaagaagaagacctttgcctggttgccacggtt
gcgtttgggatggggatcgacaagccgaatgtgcgttacgtcgcgcatctggatctgccg
ggttcggtcgaggcctattatcaggagacgggccgcgcggggcgtgacggtctgccctcc
gaggtgtggatggcctatggcatggccgatgtcatccagcgcgggcggatgatcgacgag
ggcggggccgccgacgacatcaagcgggtggagcgcgccaagctcaatgcgctgctcgcc
atctgcgaaacgcccggctgccggcgccaggcaatcctcaagcatttcggcgagagccac
gccggcggctgcggcaattgcgatacctgcctgaaacctgtcgagacctgggacggctcc
gaggcggcgatcaaggcgctggccgccatctaccggacaggcgagcgcttcggcaccggg
catctgatcgacgtgctcatgggcaacgaaaacgacaagacgatgcgtttcggccatacg
gacatgccggtcttcggcgcgggcaaggatctatccgcgaagacctggcaatcggtctat
cgccagctgcttgccgccggatacattcgcgtcgatcacacggcctttggtgcactgacg
ctcgaggaaagcgcacgcgcggtcttcaagcgcgaggtcgatgtgcgcttccgcaaggac
cggccgacgacgggcaaggcagcgcgcggccagtcctcgcgcacggcgcaggccaaggcg
gggctcgaccaggcggatcaggaactgttcgaggccctgcgcgccaagcgcatggagctt
gcaaaagaacaaggcgtgccgccttacgtcatcttccccgacacgacgctggttgcactc
gcgaccgaacggccgatggacgaggatgagatgctctcgatttccggcatcgggcaatcg
aagctggagcgttacggcgatgcgtttcttgaggtgatcacggcctattcgcggtga
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