Agrobacterium sp. RAC06: BSY240_2019
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Entry
BSY240_2019 CDS
T04501
Symbol
secD
Name
(GenBank) export membrane protein SecD
KO
K12257
SecD/SecF fusion protein
Organism
agc
Agrobacterium sp. RAC06
Pathway
agc02024
Quorum sensing
agc03060
Protein export
agc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
agc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
BSY240_2019 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
BSY240_2019 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BSY240_2019 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
agc02044
]
BSY240_2019 (secD)
Secretion system [BR:
agc02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
BSY240_2019 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecDF_P1_head
SecD_1st
Sec_GG
SecD_SecF_C
MMPL
ACR_tran
SecD-TM1
Motif
Other DBs
NCBI-ProteinID:
AOG10977
LinkDB
All DBs
Position
complement(2041864..2043858)
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AA seq
664 aa
AA seq
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MKNSIAKVMGYMLVIVLGLLVALPNVLSDATLSRFPSFMPHERVSLGLDLRGGSHLVLEV
DRPAMLDEWLQSLTQEARTALLEARIQTRSIRRDGDALAVTLANPAQLAAARQALAVLNN
PAITVTGTGLPELDVFTTGGDTVRMAPTEQGITARLGHAVDQSLEVIRQRVDQVGVAEPT
IQRVGGDRVLVQLPGEQDPSRLRALLGTTAKMSFHLLGEPGAAGVETLRDDEGRSYPVQA
TVLLAGDRLTDARVQFDQQGGQPVVSFRFDGVGAERFARITSDNVGRPFAIVLDDKVLSA
PVIREPITGGAGQISGDFSVDEANTLAALLRAGALPAKLTVIEERTVGADLGGDAIEMGI
VSGLAGFGLVVAFIVALYGAWGLLAVLALTLNVILTFAGLTIVGATLTLPGIAGIVLGIG
LAVDANVLINERIREEAAKGRGAFAAIDQGFAKAYSTIIDSNVTALIATVLLFWFGSGPV
RGFAVTMGLGIAISMFTAVSVVRVAMVAIARRWKLKTITIKPLLPFKLIKDGTRIDFMKA
RLFGIGVSAFLSISSIILFITPGLNYGVDFKGGIQLELSTTGPADLGRLRSGIEGLNLGE
VALQEFGDSNHVMLRLERQPGESRPRPTRSQRSARRSRRSTPRPRSSEPRWLAPKSAANW
QRQD
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgaagaactctatcgccaaggtgatgggctatatgctcgtcatcgtgctcggcctgctc
gtggctctgccaaacgtgctctccgacgcaaccctgtcccgctttccttccttcatgccc
cacgagcgcgtctctctcggtctcgatctgcgcggcggatcccatctcgttctggaggtg
gatcgtcctgccatgctcgacgaatggcttcagagcctgacccaggaagcgcgtaccgcc
ttgctcgaagcccgcatccagacacgcagcatccgccgtgacggcgacgcccttgctgtc
acgctggccaaccccgcccagcttgctgcggcaagacaggcgcttgcggtgctcaataac
cctgcgatcaccgtcaccgggactggcctgccggagctcgatgtcttcacaaccggcggc
gacacggtgcgcatggcgccaaccgaacagggtatcacggcgcgcctcggccatgccgtc
gaccagagcctcgaagtcattcgccagcgtgtcgatcaggtcggcgtggccgaacccacc
atccagcgtgtcggtggcgaccgtgttctcgtccagcttccgggagagcaggatccgtca
cggctgcgggcgcttctcggcacgaccgcgaagatgagctttcatctgctcggcgagccg
ggtgccgccggcgtcgagacgctgagggatgacgaaggtcgcagctatccggtgcaggca
acggtgctgctggccggtgacaggcttaccgatgcgcgcgtccagttcgaccagcagggc
ggccagccggtggtgtcattccgcttcgatggcgtcggcgcggaacgctttgcccgcatc
acgagcgacaatgtcggccgtcccttcgccatcgtgctcgacgacaaggtcctgagcgcg
ccggtcatccgtgagccgatcacaggtggagcgggacagatctccggggacttttcggtc
gatgaggccaatacgctcgcggcactcttgcgcgccggtgcgctccccgccaagctcacc
gttatcgaagaacgcaccgtcggcgccgacctcggtggcgacgcgatagaaatgggcatc
gtatcgggtcttgccggtttcggcctggtcgttgccttcatcgtcgcgctctatggcgcc
tggggcctgctggccgtgctcgctctgaccctgaacgtcatcctcacctttgcagggctg
accatcgtcggggcgacgctcaccttacccgggatcgcggggatcgtgcttggtatcggt
cttgcggtcgacgcgaacgtcttgatcaacgaacgtatccgcgaggaggcggccaagggg
cgaggggccttcgcggccatcgaccagggcttcgccaaggcctattcgacgatcatcgac
agcaatgtcacggccctgatcgcaaccgtgctcctgttctggttcggctcgggtccggtg
cgcggctttgccgtcaccatgggcctcggcatcgcaatctcgatgttcaccgccgtctcg
gtcgtccgtgtcgccatggttgccatcgctcgccgctggaaactcaagacgatcacgatc
aagccgctgttgccgttcaagctgatcaaggacggcaccaggatcgacttcatgaaggcg
cgcctgttcggtatcggtgtttcggccttcctgtcgatctcgtcgatcatccttttcatc
acacccggcctcaactacggcgtcgatttcaagggcggcatccaacttgaactgtcgaca
accgggcccgccgatctaggccgtctccgctccgggatcgagggattgaacctcggggaa
gtcgccttgcaggagttcggtgacagcaatcacgtcatgctgcgcctcgagcggcagccg
ggggagagcaggcccagaccgacgcggtcacaaaggtccgcgaggcgatccagacgatcg
acgcctcggccaagatcgagcgaaccgaggtggttggccccaaagtcagcggcgaactgg
cagcggcaggactga
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