Agrobacterium sp. RAC06: BSY240_2280
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Entry
BSY240_2280 CDS
T04501
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
agc
Agrobacterium sp. RAC06
Brite
KEGG Orthology (KO) [BR:
agc00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
BSY240_2280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
MZB
ResIII
Motif
Other DBs
NCBI-ProteinID:
AOG08982
UniProt:
A0AAI8D1I3
LinkDB
All DBs
Position
2336811..2342279
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AA seq
1822 aa
AA seq
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MKHATPTSVIDYVRDGYRRYYDSAFWMRDPAIMAERLAILNSYGVMAQEPLIEAVPQYPS
LRPIEETCREAGLDPAVAKNLAHVVFGGDTSIKLREHQAQALRTGMRGDEEGRCNVVVTS
GTGSGKTESFLLPLLARLMQERRNGVGPVGLNPWWERELTTANATWRHARDGMEPYVTPA
VRAMVLYPTNALVEDQISRLRQAAARALAIHGKPLFYFGRYTGATIGSTWVPPVALKAAD
RNRINEVGREVNRIAREVVAIEQAMRAEGRKEDGVLEVCSQFQDPRIGEMLTRWDMIASP
PDILITNTSMMNIMLMRDVEAPIFESTRRWLQQDSNNKFTLIVDELHSYRGTQGTEVALV
VRNMLDRLGLGPDSEQLRCIATSASLDGEAGKEYLEQFFGVPGRTFAIYPGNPKVFDVEL
PVNPSVIEKNSAALADGGEAATAALALITSHFSPREALASACRVAGQALVFNPTTGKQEP
VVRPASLSSISAALFGEETRTDLLEPLFIAAKMEGRGSWEEPKPTFRSHMFLRQVQGIWA
CSNPSCTEVPENFRSEGRKIGRLFKAPAMKCNCGGQVLELLYCYDCGEAFLGGFVVPSTD
GGLSGLTFLEATKAGEGNSKASQVFERTRDEFRWYWPGGKIPAGNASWTHTSPSKKTIRL
QFVKGRFDPFVGTLNQGEDGGVVFDVSGNLADNEKIAALPENCPCCGSSRSFFNSRDSKT
FFRGVVETPIRGLRTGLNVTTQLVADRVMFATSDTNDAEKMIAFTDSRDDAADLAAGLEL
HHFRDLIRQLIFVGIQPRAVPSSGELETLVGKDPDSDPEVRRVLDEAERRTPGVFNAVRA
NKFSAASTSEKELIAKHDASLAANSVTWPSLLTSMRNELIRLGQNPAGTEASRSKWGDGK
TPWWRYFDPPNDEWKPLDNDVAADERRRIMGYFSTHVAKSLFDKAGRDMESMRIATIEVE
GRAGPALGLDEEVAHGVLANVVRVLGHTRHFVGERTRTSTNLPQAVAAYVDKVSGLLNRD
KNELGATIGEFLGSRGIISENWLLRMDNHTNLPLKIVPAGERPLFRCDSCSRLTMVLPVK
ACTTPHCQGHQFTQVENPGEDYYSWVSREPAHRTAVAELTGQTKPMSEQRRRQRLFKGTA
FLGDETITTHGLEALSVTTTMEVGVDIGSLKLVLMANMPPQRFNYQQRVGRAGRAGQAFS
YAVTISRGAAHDDYYFNNPERMTGDVPPQPQLDLSRPEIIRRVLAAECLRRAFGQLDPGP
TRNEESLHGNFGRAGEWLGIYREPVTAWLAGASDVDYVAARLAAHTGLVGRERVLVDYIR
TSLPAEIDECVQDSRFIQEELSHRLAVAGLMPMFGFPTQVRSLFRDDFKASKVEQTVISD
RPLDHAVWAFSPGSEIPKDKQLNTASGFVFKKDGFRGIENQPEPLGKAMPFTRCTSPSCG
AIAHGSSTSCGVCQQPSRNFSLYQPKGFLASYKANDYDGQRQRGPALPPPVRAFPQEYGD
LACGPMKLAIGPGPIAVVNDNGGRLYDFYQEINNRVAVRDPDLFRVSVPWPDPTTQPFDK
GAIGAVFTTDVLSFHIAGAAGIGNLGVLDVRGQPSARAAMASFAELVKLSLATALDVDPS
EFRVGRQPLAVPTCETEQVFVADALENGAGYARWASEPAHMEGAIKAFYGSVAPKWEHPR
HSDDCDRSCPDCLRNYSNRFSHGMLDWRLALDLADLILGNPLKLERWLEGAEDPSIDAFL
RICEGAGLSVERDYSSEGLPVLRSGSRALVLGHPLWHTQNGLLQPQQISARDELRTSGVE
PLFVDVRDFSARSAAYFLRLQS
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atgaagcacgctacgcccaccagcgtcattgattatgttcgggacggttaccgccgctac
tatgacagcgcgttctggatgcgagatcccgccatcatggcggaacgcttggcgatccta
aactcctacggagtgatggcgcaggagccactgatcgaggcagtaccgcaatatccgtcc
cttaggcctattgaagagacctgccgggaggcggggcttgatccggccgtagcgaaaaac
cttgcccatgtcgttttcgggggcgataccagcatcaagctgagggaacaccaagcgcag
gccttgcgcacgggcatgcgaggcgatgaggaaggacgatgcaatgtcgtcgtcacttca
ggaacgggctcgggcaagactgagtcgttcctgttgcccctgttggcgcgcctcatgcag
gagcgtcgtaacggcgtgggaccagtgggcctcaacccttggtgggaacgcgagttgacc
acggctaatgcgacctggcgacacgcccgcgatggcatggaaccttatgttacgcctgcc
gtgcgcgcgatggtgctctatccaacgaatgctctggtggaagaccagatctcacgactg
cgccaagcggcagcgcgcgccttggccatccatgggaagccgctattctactttggacgc
tacactggcgcgaccattggctcgacatgggttcccccggtagcgctcaaggcagcagac
cgcaatcgcatcaacgaggtcggccgcgaggtgaaccgcattgcacgcgaggtcgtagcg
atcgagcaggccatgcgggccgaagggcgcaaggaggacggcgtccttgaggtttgcagc
caattccaagatccccgcatcggggaaatgctcacgcgctgggacatgatcgcgtccccg
ccagatatcctcatcaccaacaccagcatgatgaacatcatgcttatgcgtgacgtggag
gcgcctatcttcgagagcacgcgccgttggcttcagcaagatagcaacaacaagttcacg
ctcatcgtcgacgaacttcatagctaccgtggcacgcaagggaccgaagtggcccttgtt
gtgcgcaacatgctcgatcgcctcggtttgggtccagattccgagcagctgcgctgcatt
gcaacgagcgcctccttggatggtgaagcgggcaaggaatacctagagcaattctttggc
gttcccggccggacgtttgccatctaccccggaaatccgaaagtgttcgatgtcgagctg
ccggttaatccaagtgttatcgaaaaaaactctgcggccctcgccgatggaggagaggcg
gctaccgcggcgctggctttgattacgagtcatttctcgccgagggaagccctcgcctcc
gcgtgccgcgttgccggccaggcactggtctttaatcccacgacgggcaagcaagaaccg
gtggtgcgcccggcatcattgtcgtcaatatcggccgccctgtttggcgaggagacgagg
accgatctccttgagccgttgttcattgccgcgaagatggaaggtcgcggatcgtgggaa
gagccaaagcccacgttccggtcccacatgttccttcgtcaggtccaaggcatatgggcg
tgctcaaatccatcttgcacggaagtccccgagaatttccggtcggaagggcgcaagatc
ggccgcctgttcaaggcaccagccatgaagtgcaattgcggtgggcaagtccttgaactc
ctctattgctatgattgcggggaagctttcctcggaggctttgtcgtgccgtccacggat
ggcgggctgtcagggcttacattcctggaagcaacgaaggcaggggaaggcaatagcaag
gcaagccaggtctttgagcgcacccgcgacgaattccgttggtactggcccggtggaaag
attcctgccgggaatgcgagctggactcatacatcaccaagcaaaaaaacgatcaggttg
cagtttgtgaaaggtcgattcgatcccttcgtcggaacactcaaccaaggggaagatggt
ggcgttgtattcgacgtgtctggcaatcttgctgacaatgagaaaatagccgcccttcct
gaaaactgcccttgctgcggcagctctcgttccttcttcaattcccgcgacagcaagacc
ttcttcaggggcgtcgttgaaacgccgatccgcgggttgcggaccggtttgaatgtcacg
acgcagctcgtggcggaccgtgtgatgttcgccactagtgataccaatgacgcggaaaaa
atgattgcgttcacggatagtcgtgacgatgcagcggacctcgcggctgggttggagctt
catcacttccgagatctcatccgccagctaatattcgtaggcatacaaccgcgcgccgta
ccctccagtggagagcttgagacactcgtcggcaaggatcccgattctgatcctgaggtg
cgccgcgtcctagacgaggcagagcggcggacacctggcgtattcaatgccgttagggcc
aataaattcagcgctgcaagtacaagcgagaaagaactcatcgccaagcatgatgccagc
ctcgcggccaattccgtgacctggccgtccctgctgacatcaatgcgcaatgaactcatc
aggctggggcaaaaccctgctggaactgaggctagccgctcaaaatggggtgacggcaag
acgccgtggtggcgttactttgacccgccaaacgatgaatggaagcctctggacaacgac
gtcgcggccgacgaacgtcgccggatcatggggtatttttcaactcatgtcgcgaaatcc
ttgttcgacaaggctggacgcgacatggagtccatgcggatcgctaccatcgaggttgaa
ggcagggctgggcccgccctcggcctcgatgaggaggttgcgcacggggtgttggctaac
gttgttcgcgtcctcggtcatacacggcattttgtcggcgagcgtacaaggacttcaacg
aacctgccccaagccgtggccgcttatgtcgacaaagtttccggcctgctcaaccgagat
aaaaacgagctaggtgccaccatcggtgaattcctgggaagtcgagggatcatcagcgag
aattggctcttgcggatggacaatcacacaaaccttcccttgaaaattgttccggctggg
gaacggccgctctttaggtgcgacagctgttctcgcctcaccatggtgctacccgtcaag
gcatgcacgacaccgcattgccaagggcatcagttcacccaagtcgagaatcccggcgaa
gactactatagctgggtatctcgcgagcccgcccatcgcacggccgtggcggagctgacg
ggtcagacaaagccaatgagcgagcagcgacgcaggcaaaggctgttcaagggcacggcc
ttccttggcgacgaaacgataacaacgcatggactagaggcgctatccgtcacgacgacg
atggaggtcggcgtcgacatcggttccttgaagcttgtcctgatggccaacatgcctccc
cagcgcttcaattaccagcagcgcgtgggtcgcgccggtcgtgcgggacaggcattctca
tatgctgtcacgatctcgcgtggcgctgcccacgacgactattatttcaacaatccggaa
cgaatgacaggtgatgttccgccgcagccgcagcttgatctttcccgcccagagatcatc
cggcgcgtccttgctgcagaatgcttacgccgtgcatttggacaattggatccgggccca
acccgcaacgaagagagcctgcatggaaattttggccgggcgggcgagtggctagggatc
taccgagagcccgttacagcttggttggccggggcaagcgacgttgactatgttgctgca
cgccttgctgcccacactgggttggttggccgggaacgagtgcttgtagactatattcgc
accagcttgcctgccgagattgatgagtgcgttcaggattcccgtttcatccaagaggaa
ttgagccaccgcttggcggtcgctggcctgatgccgatgtttggattcccgacgcaagta
cgcagcttgtttcgcgacgatttcaaggcaagcaaggtcgagcaaaccgtcatcagtgat
cgtccgctagatcatgcggtctgggcattctctcccggctctgagattcctaaagacaaa
cagctcaatacggcgagcgggttcgtcttcaagaaggatgggttcagaggtatcgagaac
cagcctgaacctttggggaaagcgatgccgttcacgcgctgcacaagtccgtcttgcggt
gcgatcgcgcatggcagcagcacgagttgtggagtttgccagcagccgtcacgcaacttc
tccctgtaccaaccaaaaggcttcttggcttcatacaaggcaaatgactatgacggccaa
agacagcgcggccccgcgcttccgccgcctgtccgtgccttcccgcaagaatacggcgat
ctcgcatgtggtccgatgaaactggccatagggcctggacccatcgctgtcgtgaatgac
aatggaggacgcctgtacgatttttatcaagagatcaacaatcgggttgctgtaagggat
cccgaccttttccgggtgtccgtgccgtggccagacccgacaacgcaaccattcgacaag
ggggcgattggcgcggtgttcacaacggatgtcctcagcttccatatcgcaggagcagcg
gggatcgggaaccttggcgttctagatgtgcgaggccaaccttccgcccgcgcggcgatg
gcgtcttttgctgagttggtgaagctttcacttgcaaccgcgcttgacgtcgatccctcg
gaattccgcgtgggtcgccagccgcttgcggttccgacctgtgaaactgagcaagttttc
gtagcagacgccttggagaatggtgctggctacgcccgctgggcgtccgagccggcgcac
atggagggcgcaatcaaagcgttctacggcagcgtcgcgccaaagtgggagcaccctcgc
cattctgatgactgtgatcggtcatgtcctgactgcctgcgcaattacagcaaccgtttt
agccacggcatgctggattggcggctggctctggaccttgctgacctgattctcggcaat
cccctcaagctggagcgatggttggagggagcggaggatccttcgatcgatgctttcctg
cggatttgcgagggggcaggattgtccgttgagcgggactacagcagcgagggattgccg
gtcttgcgatccgggagtcgcgcattggtcctcggccatccattgtggcatacacagaat
ggtttgctgcaaccccaacaaatatcagcgcgtgacgagctgaggacgagtggcgttgag
cccttgttcgttgacgtcagggatttttcggcccgcagtgcggcctatttcttgaggttg
caatcttga
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