Agrobacterium sp. RAC06: BSY240_2373
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Entry
BSY240_2373 CDS
T04501
Name
(GenBank) crp-like helix-turn-helix domain protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
agc
Agrobacterium sp. RAC06
Pathway
agc02020
Two-component system
agc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
agc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BSY240_2373
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BSY240_2373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
agc03000
]
BSY240_2373
Transcription factors [BR:
agc03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
BSY240_2373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
cNMP_binding
HVO_A0261_N
Crp
GntR
MarR
MarR_2
HTH_24
HTH_38
HTH_IclR
HTH_11
HTH_Cmi2_C
TrmB
Motif
Other DBs
NCBI-ProteinID:
AOG11042
LinkDB
All DBs
Position
complement(2441117..2441851)
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AA seq
244 aa
AA seq
DB search
MKANATTGSALPLPATTLPTLRGCAIFAGLTPEEDREWLLRCHSRTLSAGESLVDFEDMS
KDVFIVQTGEIRAVLRFSVGKEAILGSFKRGDILGEQSAIDDMARSASLMAVSDATVTVI
PCIVFLDILRQRSDVALALLQLLSKRIRAMNDRLSELSFLDTKHRLYNTLLRLSRVRNDG
GRERIISPPLVHAELAEHIGASRETVSREMSRLAREQLVERTSRAIVLKNPVELSRRISR
ALEG
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaaacgctacgacaggctccgccctgccgcttccggcaacaacgcttccgaca
ctgcgcggatgtgcgatttttgctggtctcacgccggaagaggaccgcgaatggcttttg
cgctgccattctcgtacgctgagtgccggcgaaagtctggtcgacttcgaggatatgtcc
aaggatgtcttcatcgtccagacgggagagatccgcgccgtgctgcgtttctccgtcggt
aaggaggccattctcggcagcttcaagcgcggcgacatcctcggcgaacagtccgccatc
gatgacatggcccgttccgcaagcctcatggccgttagcgacgcaacggtgaccgtgatc
ccctgcatcgtctttctcgacattctgcggcagaggtctgatgtcgcgctggcgctgctg
cagcttctttcgaagcgtatcagggcgatgaacgatcgcctgtcggaactctcgttcctc
gacaccaagcatcgcctctacaacacactgctcaggctttcgcgcgtgcgcaacgacggt
ggtcgcgaacgcatcatttcgccgccgctggtgcatgcggaactggcagaacatatcggc
gctagccgagagacggtgtcgcgcgagatgtcgaggctggcgcgcgaacagctggtggag
cgcaccagccgcgccatcgttctgaagaaccccgtggaactgtcccgaaggatctcgcgc
gccctcgagggctga
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