Agrobacterium sp. RAC06: BSY240_2659
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Entry
BSY240_2659 CDS
T04501
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
agc
Agrobacterium sp. RAC06
Pathway
agc03030
DNA replication
agc03410
Base excision repair
agc03420
Nucleotide excision repair
agc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BSY240_2659 (polA)
03410 Base excision repair
BSY240_2659 (polA)
03420 Nucleotide excision repair
BSY240_2659 (polA)
03440 Homologous recombination
BSY240_2659 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agc03032
]
BSY240_2659 (polA)
03400 DNA repair and recombination proteins [BR:
agc03400
]
BSY240_2659 (polA)
Enzymes [BR:
agc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BSY240_2659 (polA)
DNA replication proteins [BR:
agc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BSY240_2659 (polA)
DNA repair and recombination proteins [BR:
agc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BSY240_2659 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BSY240_2659 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
HHH
IMS_HHH
Transposase_20
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
AOG09111
LinkDB
All DBs
Position
complement(2714908..2717892)
Genome browser
AA seq
994 aa
AA seq
DB search
MKKGDHLFLVDGSGFIFRAFHAIPALNRKSDGLPVNAVSGFCNMLWKLLRDARNTDVGVT
PTHLAVIFDYSSTTFRKEIYPLYKANRSAPPEDLIPQFGLIRHATRAFNLPCIETEGFEA
DDIIATYARQAEAVGADVTIVSSDKDLMQLLTANVHMYDAMKDKQIGIPDVIEKWGVPPE
KMIDLQAMTGDSTDNVPGIPGIGPKTAAQLLEEFGDLETLLSRAGEIKQVKRRENIIANA
ELARVSRQLVELRTDVPIDMKLEDLVLEPQDGPKLIGFLKAMEFTTLTRRVAEVCDCDAG
AIDAAVVPVEWGDAARGPDLDVGDVPASSGTPTSALSAASSSAPAASPDGKTPADLAASR
ANAFAGKPIDRSAYVTIRDIETLELWIAAARETGLVAFDTETTSLDPMQAELVGVSLAIQ
DNVLSPGSTDIRAAYIPLTHKTGVGDLLGGGHAEGQIPMKDALAALKGLLEDPSVLKVAQ
NLKYDYLVMKRHGVTLQSFDDTMLMSYVLDAGKGNHGMDGLSEKWLGHTPIPYKDVAGSG
KSSVTFDLVDIDRATAYAAEDADVTLRLWLVLKPRLAAEGLTRIYERLERPLVPVLAHME
ERGITVDRQILSRLSGELAQKAAATEDEVYELAGERFNIGSPKQLGDILFGRMGLPGGSK
TKTGQWSTSAQVLEDLAAEGAPLPRKIVDWRQLTKLKSTYTDALPGYIHPQTKRVHTGYS
LASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPGHKLLSADYSQIELRVLAHVAEI
PQLRQAFADGIDIHAMTASEMFGVPVEGMPSEVRRRAKAINFGIIYGISAFGLANQLSIE
RSEAGDYIKKYFERFPGIKDYMESTKAFAREHGYVETIFGRRAHYPEIKSSNPSMRAFNE
RAAINAPIQGSAADVIRRAMIQIEPALVAAGLAERCRMLLQVHDELIFEVEDEAVDTAMP
VIVDIMENAAMPAVSMRVPLKVDARAAHNWDEAH
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcatctcttcctcgtcgacggctcgggtttcatcttccgcgccttc
cacgccatcccggccctcaaccgcaaatcggacggcctgcccgtcaatgcggtttccggc
ttctgcaacatgctgtggaagctgctgcgcgatgcgcgcaatacagatgtcggggtcacg
ccgacccatctcgctgttatcttcgactactcctcgacgacattccgcaaggaaatctat
ccactctacaaggcaaatcgctcggccccgccggaagatctgatcccgcaattcggcctg
atccgtcatgcgacgcgcgccttcaacctgccctgcatcgagaccgaaggcttcgaggcc
gatgacatcatcgccacctatgcccgccaggccgaggccgtcggcgccgatgtgacgatc
gtctcctccgacaaggacctgatgcagctcctgaccgcgaacgtgcacatgtacgacgcg
atgaaggacaagcagatcggcattcccgacgtcatcgagaaatggggcgtgccgccggaa
aagatgatcgatctgcaggcgatgaccggcgattcgaccgacaacgtgcctggcatcccc
ggcatcggtccgaagaccgccgcccagcttctcgaagagtttggcgatctcgaaactctg
ctgtcccgggccggcgaaatcaagcaggtcaagcgccgcgaaaacatcatcgccaatgcc
gagctcgcccgggtctcccgccagttggtcgaactgcgcaccgacgtgccgatcgacatg
aagctcgaagacctggtgctggagccgcaggacggaccaaagctgatcggcttcctcaag
gcgatggaattcaccaccctgacccggcgcgtcgcggaggtctgcgattgtgatgcgggt
gccatcgacgccgctgttgttccggtcgaatggggtgacgccgcccgcgggcccgatctc
gacgtcggcgacgttcccgcctcgtccgggacgccgacctcggcgctgtcagccgcatcg
tcttcggctccggcagcaagccccgacggcaagacacccgccgatctcgccgcaagccgc
gccaatgcattcgccggcaagccgatcgacagaagcgcatacgtgacgatccgcgatatc
gagaccctcgagctctggattgctgctgcccgggaaaccggcctcgtcgccttcgacacc
gagaccacctcgctcgatcccatgcaggccgaactcgtcggcgtctcgctcgccatccag
gacaacgtcctgtcacccggctcgacggacatccgcgcggcctacattccgctcacccac
aagaccggtgtcggcgatctcctcggcggcggtcatgccgaaggccagatcccgatgaag
gatgcgcttgccgcattgaagggcctgctcgaagatccgtcggtcctgaaggtcgcgcag
aacctcaaatacgactacctggtgatgaagcgccacggcgttacgctccagtccttcgac
gacaccatgctgatgtcctacgtgctcgacgccggcaagggcaatcacggcatggacggc
ctgtcggagaagtggctcggccataccccgatcccctacaaggacgtcgccggttccggc
aaatcctccgtcacctttgatctcgtcgacatcgatcgcgccaccgcctatgcggccgaa
gatgccgacgtgacgctacgtctctggctggtgttgaaaccccgtctggcagccgaaggc
ctcacccgtatctacgagcgtctggagcgcccgttggtgccggtgctcgcccatatggaa
gagcgcggcatcaccgtcgatcgccagatcctctcccgcctgtcgggcgagcttgcccag
aaggccgccgccaccgaggacgaggtttacgaactcgccggcgagcgcttcaacatcggc
tcgccgaaacagctcggcgatatcctgtttggccgcatgggcctgcccggcggctccaag
accaagaccggccagtggtccacctcagcccaggtgctggaagatctcgccgccgagggc
gcgccgctgccgcgcaagatcgtcgactggcgccagctcaccaagctgaagtccacctat
accgacgcgcttcctggctatatccatccgcagaccaagcgcgtccacacgggctattcg
ctcgcctcgacgacgacgggccgcctgtcatcgtcggaaccgaacctgcagaacatcccg
gtccgcaccgccgaaggccgcaagatccgcaccgccttcatctcgacgccgggccacaag
ctgctctcggccgactacagccagatcgagctgcgcgtgctcgcccatgtcgccgagatc
ccgcagctgcgtcaggccttcgccgacggcatcgatatccatgccatgaccgcgtcggaa
atgttcggcgtgccggtcgagggcatgccgtcggaagtccgccgccgcgccaaggcgatc
aacttcggcatcatctacggcatctcggccttcggtctggccaatcagctgagcatcgag
cgctcggaagccggcgactacatcaagaagtatttcgagcgcttccccggcatcaaggac
tacatggagagcaccaaagccttcgcccgcgagcacggctatgtggaaaccatcttcggc
cgccgcgcccattacccggagatcaagtcgtccaacccctcgatgcgcgccttcaacgaa
cgcgccgccatcaatgccccgatccagggctcggccgccgacgtgatccgccgcgccatg
atccagatcgaacctgcactcgtggctgccggtcttgccgaacgctgccgcatgctgctg
caggtgcatgacgaactgatcttcgaggtcgaggacgaggcggtcgataccgccatgcct
gtgatcgtggacatcatggaaaatgccgccatgccggccgtctcgatgcgcgtgccgctc
aaggtcgacgctcgcgccgcccacaattgggacgaggcacactaa
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