Agrobacterium sp. RAC06: BSY240_2845
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Entry
BSY240_2845 CDS
T04501
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
agc
Agrobacterium sp. RAC06
Brite
KEGG Orthology (KO) [BR:
agc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agc03400
]
BSY240_2845 (addB)
Enzymes [BR:
agc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BSY240_2845 (addB)
DNA repair and recombination proteins [BR:
agc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BSY240_2845 (addB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AOG11215
UniProt:
A0AAI8D5Z9
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All DBs
Position
2914115..2917303
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AA seq
1062 aa
AA seq
DB search
MVSKAPRLLTIPPGRPFLRTLTEALLDGRLTDDFRYDPADPLSLAGVTLLVPTRRAARVL
RSEFVDLLGGRAAILPDIRTLGETDDDSGFFDLDAPQLMDLAPPVSGTVMLLELARLILA
WRNQLPEIVRSIHSDTPFVAPASPADAVWLARALVELIEAAETEGCDWTELENLQSADFG
SWWQLTLEFLKIATLFWPARLQELVRSSPARHRDAVLRAEAERFRRQGASGPVIVAGSTG
SIPAAAELIAAIAELDQGVVVLPGLDLDMPDEDWAKLNDREISVIRPSPAVRGHPQYGLA
HLLRHMKLERADVQALEASDPALRDRAEFLSRAMAPAEATDTWKAWRQDIDDSRLLAAFR
DVALIETANEREEATAIAIALRLGLEEVSDNPESRVALITPDRALARRVMSELARFGIEA
DDSAGTPMTGTQAAMLTQVVAEACLRPGDPVAIVSLIKHPLARFGFTAEDMRKAADALER
IALRGGLKSLDLAEMEPLFAEGLEAHLADRHKPQWRISIAPEEIELARLLASRVTKAVDP
LVSSVIRSTDGRVLSQTLTVSDWAERTGRVLEAVTVDERGDLAGLWGDAAGEALARLLAE
VLETDGQIEADGAQWVDILTALMAGQAVKPRAMRHPRVFIFGTLEARLQNVDMMVIGGMN
EGSWPSQTKNNPFLSRVMKTEVGLEPPERQIGQVAHDFQMACGTRKLIFSRSLRQGSAPT
VASRWLQRLMALGGPLLEDEMRKRGQIYRRYADLIDQGENQAPAQRPAPRPRAELQPRSF
SFSEVGRFRRDPYSIYARRILRLDPVDPFNQDPGAAERGTLYHRIVERFIREDHDPARLD
ALDILHRITDEEFLTEALPLHIDIVWRQRFYSVASAFLSWERQRRPEIKRSMTEVRGNVL
LRPVDITISGIADRIDIRGGGFADIIDYKTGLNPSANQARSLLDPQLALEAAALLQGAFK
PAGDVKPLNLVYVRLRPGDRFSADQVNNEMATRGDNKKSALELATQSVDELGRFVQALQS
GERGYVSRLIPAEQNAYGGEYDHLARVAEWSTAEAEEGAGDE
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggtgagcaaggcgccgcgtctgctgacgatcccaccgggccggcccttcctcaggacg
ctgacggaagcgctgctcgacggtcgcctcaccgacgattttcgctatgaccccgccgat
ccgctttctctggcaggcgtcactctgctcgttccgacccgacgcgcagcgcgcgtgctg
cggtctgagttcgtcgatctgctcggtggtcgcgcggcgatccttcccgacattcgcacg
ctcggcgagacggatgacgacagtggcttcttcgatctcgatgcgccgcagctgatggat
cttgccccgccggtgagcggcaccgtcatgcttctggaactcgcccggctgatccttgcc
tggcgcaaccagctgccggagatcgtccggtcaatccattcggacacgccgttcgtggca
ccggcgagcccggcagatgccgtctggctggcacgggcgctggtggagctgatcgaagca
gccgagacggaaggttgcgactggacggaattggagaaccttcaatcggccgacttcggc
tcctggtggcagctgacgctggagtttctgaaaattgcgaccctgttctggcctgcacgg
ctgcaggaactggtgcggtcgtctccggcccgccaccgcgatgcggtgctgagggccgag
gccgaacggttcagaagacagggtgcttccggtcccgtcatcgttgcgggctccaccggc
tcgatcccggcagcggccgagctcattgccgcgattgccgagctcgaccagggggtcgtg
gtgctgcccgggcttgatctggacatgccggacgaggactgggcgaagctcaacgatcgc
gagatctccgtgatacgtccaagccctgccgtgcgcgggcatccgcaatatggccttgcc
catctgctgcggcatatgaaacttgaacgcgccgatgttcaggctctcgaagcctccgat
ccggcgctccgggatcgagccgaatttctgtcgcgtgccatggcgcccgccgaggcgacc
gacacctggaaggcctggcggcaggatatcgacgattcacgcctgctcgcggcatttcgc
gatgtcgccctgatcgagacggccaatgagcgcgaagaagcaacggcgattgcaattgcg
ctccggctggggctcgaagaggtttccgacaatcccgaaagccgggtggcgctgatcacg
ccggatcgcgcgctggcgcggcgtgtcatgtccgaactcgcgcggttcgggatcgaggcg
gatgattcggcgggtacgccgatgaccgggacccaggctgccatgctgacccaggtggtg
gccgaggcctgcctgcgtccgggcgatccggtggccatcgtctccctgatcaagcatcct
ctggcacggttcggtttcacggccgaggatatgcgcaaggctgccgacgcgctggaacgc
atcgcgctgcgtggcggtctgaagagcctcgaccttgccgagatggaaccgttgtttgcg
gaagggctcgaagcgcatctggccgaccgtcacaagccgcaatggcgcatctcgattgcg
cccgaggagatcgagcttgctcgcctgctggcgagccgggtaaccaaggcggtcgacccc
ctcgtctcgtccgtcatccggtcgactgacgggcgcgtgctgtcgcagacattgacggtc
agtgactgggccgagcgcacgggtcgggtgctggaagccgtcacggtcgacgagcgcggt
gatctggccggtctctggggcgatgcggcgggcgaggctctggcgaggctcctcgccgag
gtgcttgagacggacggacagatcgaggcggacggcgcgcaatgggttgatatcctgacg
gcgctgatggccggccaggcggtcaagccacgcgccatgcggcatccccgcgtcttcatc
ttcgggacgctcgaagcgcgcctgcagaatgtcgacatgatggtgatcggcgggatgaac
gaggggagctggccgagccagaccaagaacaatcccttcctgtcgcgcgtcatgaagacc
gaagtcgggcttgagccgccggaacggcagatcggccaggtggcgcatgacttccagatg
gcctgtggcacgcggaaactgatcttctcgcgctcgctacgccaaggctctgcgccgacg
gtcgcctctcgctggctgcagcgtctgatggctcttggcgggccccttctggaagacgag
atgcgaaagcgcggacagatctatcggcgctacgccgacctgatcgaccagggcgaaaac
caggcaccggcacagcgccccgcgccacgaccgcgcgcagaacttcagccgcgtagcttc
agcttttccgaggtggggcgcttccggcgggacccctattccatctatgcgcggcgcatc
ctgcgtctcgatcccgtcgatcccttcaaccaggatccgggggcggcggaacgcgggacg
ctctatcaccgcatcgtcgagcgtttcatccgcgaggatcatgacccggcccggctggac
gcgctcgatatcctgcaccggatcaccgatgaggagttcctgacggaggctctgccgctg
cacatcgatatcgtctggcgtcagcgcttctacagtgtcgcctctgcctttctcagctgg
gagcggcagcggagaccggaaatcaagcgctcgatgacggaagtcagaggcaatgtgctg
cttcgccctgttgatatcaccattagcggaatagcggaccggatcgatatccgaggcggc
ggctttgccgatatcatcgactacaagacgggcctcaacccgagcgccaatcaggcgcgc
agcctgcttgacccacaattggcgctggaggcggcggcccttctccaaggcgccttcaag
cctgccggtgacgtgaaacctctcaatcttgtctatgtacgcctgagacctggcgatcgc
ttttcggcagaccaggtgaacaacgaaatggcaacgcggggcgacaacaagaagtctgcg
cttgagcttgcgacgcaatccgttgacgaacttggccgcttcgtccaggcgctgcagagc
ggcgagcggggttatgtctcccgcctcatcccggcggaacagaacgcctatggcggcgaa
tacgaccatctggcgcgagtcgcggagtggtcgacggcggaagccgaggaaggagccggc
gatgagtga
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